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| Locus | Common name | Short description |
| AT1G50600 | SCL5 | scarecrow-like 5 (.1) |
>AT1G50600.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, KpnI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, XbaI, XhoI
| Name | Recognition sequence | Cut positions |
| BglII | A|GATCT | 649 |
| HindIII | A|AGCTT | 107, 396 |
| HpaI | GTT|AAC | 1282 |
| NcoI | C|CATGG | 1209 |
| NdeI | CA|TATG | 232 |
| NheI | G|CTAGC | 1176 |
| SacI | GAGCT|C | 1659 |
| StyI | C|C[AT][AT]GG | 1209 |
Click here to view TAIR data
>AT1G50600.1 length:1794
ATGAGGTTAA GCGTTTTTAT TATTCCCCTG GTGGAAAGTA GGCAAGCAAG | 50 |
TGGTATCATC AACAAACAAA GCACTTCTCT TTTGATTCGA TTCTCTCTTT | 100 |
ACCTTGAAGC TTCAATATCA ACCAAATCTT TTTTCTCAAA ATCTCAAAGA | 150 |
ATCTCTCAAA CTCAGTCTCC TATCTGTCTC TCTGCAAACT ATTACCAACC | 200 |
AGATAATTTA GATATGGAAG CTACTCAGAA ACATATGATT CAAGAAGGAT | 250 |
CTTCAATGTT TTACCATCAA CCATCTTCAG TCAAACAAAT GGACCTTTCT | 300 |
GTTCAGACAT TTGATTCTTA CTGCACACTT GAATCCTCTT CAGGCACCAA | 350 |
GTCTCATCCT TGTCTTAACA ACAAAAACAA CTCTTCTTCA ACCACAAGCT | 400 |
TTTCCTCTAA TGAAAGTCCC ATTTCTCAAG CCAACAACAA CAACTTATCA | 450 |
AGGTTTAACA ATCATTCCCC TGAAGAAAAC AATAACTCTC CCTTGAGCGG | 500 |
TTCTTCAGCG ACAAACACCA ACGAGACAGA GCTTAGTCTC ATGCTTAAAG | 550 |
ATTTGGAGAC TGCAATGATG GAGCCTGATG TAGACAACAG CTATAACAAT | 600 |
CAAGGCGGGT TTGGACAGCA GCATGGAGTT GTTTCTTCAG CTATGTATAG | 650 |
ATCTATGGAG ATGATCTCTA GGGGAGATTT AAAAGGAGTG CTCTATGAAT | 700 |
GCGCAAAAGC TGTTGAAAAC TATGATTTGG AAATGACTGA TTGGTTGATC | 750 |
TCTCAGTTAC AGCAAATGGT TTCTGTTTCT GGTGAGCCTG TTCAGCGCTT | 800 |
AGGAGCTTAT ATGCTTGAAG GTCTCGTTGC TAGGTTAGCT TCTTCGGGTA | 850 |
GCTCCATCTA TAAAGCATTG AGATGCAAAG ACCCAACGGG TCCTGAGCTT | 900 |
CTTACTTATA TGCATATCTT GTATGAAGCC TGCCCTTATT TCAAATTCGG | 950 |
TTATGAATCT GCTAATGGAG CTATAGCTGA AGCTGTGAAG AACGAAAGTT | 1000 |
TTGTGCACAT TATCGATTTC CAGATTTCTC AAGGTGGTCA ATGGGTGAGT | 1050 |
TTGATCCGTG CTCTTGGTGC TAGACCTGGT GGACCTCCGA ACGTTAGGAT | 1100 |
AACGGGAATT GATGATCCGA GATCATCGTT TGCTCGTCAA GGAGGACTTG | 1150 |
AGTTAGTTGG ACAAAGACTT GGGAAGCTAG CTGAAATGTG CGGTGTTCCG | 1200 |
TTTGAGTTCC ATGGAGCTGC TTTATGCTGC ACGGAAGTCG AAATCGAGAA | 1250 |
GCTAGGAGTT AGAAATGGAG AAGCGCTCGC GGTTAACTTC CCGCTTGTTC | 1300 |
TTCACCACAT GCCTGATGAG AGTGTAACTG TGGAGAATCA CAGAGATAGA | 1350 |
TTGTTGAGAT TGGTCAAACA CTTGTCACCA AACGTTGTGA CTCTGGTTGA | 1400 |
GCAAGAAGCG AATACAAACA CTGCGCCGTT TCTTCCCCGG TTTGTCGAGA | 1450 |
CAATGAACCA TTACTTGGCA GTTTTCGAAT CAATAGATGT GAAACTCGCT | 1500 |
AGAGATCACA AGGAAAGGAT CAATGTTGAG CAGCATTGTT TGGCTAGAGA | 1550 |
GGTTGTGAAT CTTATAGCTT GTGAAGGTGT TGAAAGAGAA GAGAGGCACG | 1600 |
AGCCACTAGG GAAATGGAGG TCTCGGTTTC ACATGGCGGG ATTTAAACCG | 1650 |
TATCCTTTGA GCTCGTATGT GAACGCAACA ATCAAAGGAT TGCTTGAGAG | 1700 |
TTATTCAGAG AAGTATACAC TTGAAGAAAG AGATGGAGCA TTGTATTTAG | 1750 |
GATGGAAGAA TCAACCTCTT ATCACTTCTT GTGCTTGGAG GTAA | 1800 |
>AT1G50600.1 longest ORF length:597
MRLSVFIIPL VESRQASGII NKQSTSLLIR FSLYLEASIS TKSFFSKSQR | 50 |
ISQTQSPICL SANYYQPDNL DMEATQKHMI QEGSSMFYHQ PSSVKQMDLS | 100 |
VQTFDSYCTL ESSSGTKSHP CLNNKNNSSS TTSFSSNESP ISQANNNNLS | 150 |
RFNNHSPEEN NNSPLSGSSA TNTNETELSL MLKDLETAMM EPDVDNSYNN | 200 |
QGGFGQQHGV VSSAMYRSME MISRGDLKGV LYECAKAVEN YDLEMTDWLI | 250 |
SQLQQMVSVS GEPVQRLGAY MLEGLVARLA SSGSSIYKAL RCKDPTGPEL | 300 |
LTYMHILYEA CPYFKFGYES ANGAIAEAVK NESFVHIIDF QISQGGQWVS | 350 |
LIRALGARPG GPPNVRITGI DDPRSSFARQ GGLELVGQRL GKLAEMCGVP | 400 |
FEFHGAALCC TEVEIEKLGV RNGEALAVNF PLVLHHMPDE SVTVENHRDR | 450 |
LLRLVKHLSP NVVTLVEQEA NTNTAPFLPR FVETMNHYLA VFESIDVKLA | 500 |
RDHKERINVE QHCLAREVVN LIACEGVERE ERHEPLGKWR SRFHMAGFKP | 550 |
YPLSSYVNAT IKGLLESYSE KYTLEERDGA LYLGWKNQPL ITSCAWR | 600 |