Locus |
Common name |
Short description |
AT1G50640 |
ATERF3 |
ethylene responsive element binding factor 3 (.1) |
>AT1G50640.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HindIII, KpnI, NdeI, NheI, NotI, PacI, PstI, SacI, SalI, SmaI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
EcoRV
| GAT|ATC |
470, 553 |
HpaI
| GTT|AAC |
379 |
NcoI
| C|CATGG |
136 |
PvuII
| CAG|CTG |
119 |
SpeI
| A|CTAGT |
391 |
StyI
| C|C[AT][AT]GG |
103, 136 |
Click here to view TAIR data
>AT1G50640.1 length:678
ATGAGGAGAG GAAGAGGCTC TTCCGCCGTC GCCGGACCTA CCGTCGTTGC | 50 |
CGCCATCAAC GGATCTGTAA AAGAAATCAG ATTCAGAGGC GTAAGGAAGA | 100 |
GACCTTGGGG ACGATTCGCA GCTGAGATCC GTGATCCATG GAAAAAAGCT | 150 |
CGTGTTTGGT TAGGTACTTT CGATTCCGCC GAAGAAGCTG CTCGCGCTTA | 200 |
CGACTCCGCC GCTCGTAACC TCCGTGGTCC TAAAGCCAAA ACTAATTTCC | 250 |
CCATCGATTC TTCTTCTCCT CCTCCTCCTA ATCTCCGATT TAATCAGATT | 300 |
CGTAATCAAA ATCAAAACCA AGTCGATCCG TTTATGGACC ACCGGTTATT | 350 |
CACCGACCAT CAACAACAGT TCCCGATTGT TAACCGGCCT ACTAGTAGCA | 400 |
GCATGAGCAG CACCGTTGAA TCGTTTAGCG GACCCAGACC TACGACGATG | 450 |
AAACCGGCCA CGACGAAGAG ATATCCTAGA ACTCCACCGG TTGTTCCGGA | 500 |
GGATTGTCAC AGCGATTGCG ATTCGTCGTC GTCTGTAATC GACGACGACG | 550 |
ACGATATCGC ATCGTCTTCA CGGCGACGGA ATCCGCCGTT TCAATTCGAT | 600 |
CTTAATTTTC CACCGTTGGA TTGTGTTGAC TTGTTCAATG GCGCTGATGA | 650 |
TCTTCACTGT ACCGATCTAC GTCTCTAA | 700 |
>AT1G50640.1 longest ORF length:225
MRRGRGSSAV AGPTVVAAIN GSVKEIRFRG VRKRPWGRFA AEIRDPWKKA | 50 |
RVWLGTFDSA EEAARAYDSA ARNLRGPKAK TNFPIDSSSP PPPNLRFNQI | 100 |
RNQNQNQVDP FMDHRLFTDH QQQFPIVNRP TSSSMSSTVE SFSGPRPTTM | 150 |
KPATTKRYPR TPPVVPEDCH SDCDSSSSVI DDDDDIASSS RRRNPPFQFD | 200 |
LNFPPLDCVD LFNGADDLHC TDLRL | 250 |
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