fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G50640 ATERF3 ethylene responsive element binding factor 3 (.1)

>AT1G50640.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HindIII, KpnI, NdeI, NheI, NotI, PacI, PstI, SacI, SalI, SmaI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRV GAT|ATC 470, 553
HpaI GTT|AAC 379
NcoI C|CATGG 136
PvuII CAG|CTG 119
SpeI A|CTAGT 391
StyI C|C[AT][AT]GG 103, 136


Click here to view TAIR data

>AT1G50640.1 length:678
ATGAGGAGAG GAAGAGGCTC TTCCGCCGTC GCCGGACCTA CCGTCGTTGC 
50
CGCCATCAAC GGATCTGTAA AAGAAATCAG ATTCAGAGGC GTAAGGAAGA 
100
GACCTTGGGG ACGATTCGCA GCTGAGATCC GTGATCCATG GAAAAAAGCT 
150
CGTGTTTGGT TAGGTACTTT CGATTCCGCC GAAGAAGCTG CTCGCGCTTA 
200
CGACTCCGCC GCTCGTAACC TCCGTGGTCC TAAAGCCAAA ACTAATTTCC 
250
CCATCGATTC TTCTTCTCCT CCTCCTCCTA ATCTCCGATT TAATCAGATT 
300
CGTAATCAAA ATCAAAACCA AGTCGATCCG TTTATGGACC ACCGGTTATT 
350
CACCGACCAT CAACAACAGT TCCCGATTGT TAACCGGCCT ACTAGTAGCA 
400
GCATGAGCAG CACCGTTGAA TCGTTTAGCG GACCCAGACC TACGACGATG 
450
AAACCGGCCA CGACGAAGAG ATATCCTAGA ACTCCACCGG TTGTTCCGGA 
500
GGATTGTCAC AGCGATTGCG ATTCGTCGTC GTCTGTAATC GACGACGACG 
550
ACGATATCGC ATCGTCTTCA CGGCGACGGA ATCCGCCGTT TCAATTCGAT 
600
CTTAATTTTC CACCGTTGGA TTGTGTTGAC TTGTTCAATG GCGCTGATGA 
650
TCTTCACTGT ACCGATCTAC GTCTCTAA
700

>AT1G50640.1 longest ORF length:225
MRRGRGSSAV AGPTVVAAIN GSVKEIRFRG VRKRPWGRFA AEIRDPWKKA 
50
RVWLGTFDSA EEAARAYDSA ARNLRGPKAK TNFPIDSSSP PPPNLRFNQI 
100
RNQNQNQVDP FMDHRLFTDH QQQFPIVNRP TSSSMSSTVE SFSGPRPTTM 
150
KPATTKRYPR TPPVVPEDCH SDCDSSSSVI DDDDDIASSS RRRNPPFQFD 
200
LNFPPLDCVD LFNGADDLHC TDLRL
250