fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G50680 AP2/B3 transcription factor family protein (.1)

>AT1G50680.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 370
HindIII A|AGCTT 219
StyI C|C[AT][AT]GG 250


Click here to view TAIR data

>AT1G50680.1 length:1014
ATGAGACTTG ATGACGAACC AGAAAACGCC CTAGTGGTTT CGTCTTCACC 
50
AAAGACGGTT GTGGCTTCTG GCAATGTCAA GTACAAAGGA GTCGTTCAGC 
100
AACAGAACGG TCATTGGGGT GCCCAGATTT ACGCAGACCA CAAAAGGATT 
150
TGGCTTGGAA CTTTCAAATC CGCTGATGAA GCCGCCACGG CTTACGATAG 
200
TGCATCTATC AAACTCCGAA GCTTTGACGC TAACTCGCAC CGGAACTTCC 
250
CTTGGTCTAC AATCACTCTC AACGAACCAG ACTTTCAAAA TTGCTACACA 
300
ACAGAGACTG TGTTGAACAT GATCAGAGAC GGTTCGTACC AACACAAATT 
350
CAGAGATTTT CTCAGAATCA GATCTCAGAT TGTTGCGAGT ATCAACATCG 
400
GGGGACCAAA ACAAGCCCGA GGAGAAGTGA ATCAAGAATC AGACAAGTGT 
450
TTTTCTTGCA CACAGCTTTT TCAGAAGGAA TTGACACCGA GCGATGTAGG 
500
GAAACTAAAT AGGCTTGTGA TACCTAAAAA GTATGCAGTG AAGTATATGC 
550
CTTTCATAAG CGCTGATCAA AGCGAGAAAG AAGAGGGTGA AATAGTAGGA 
600
TCTGTGGAAG ATGTGGAGGT TGTGTTTTAC GACAGAGCAA TGAGACAATG 
650
GAAGTTTAGG TATTGTTACT GGAAAAGTAG CCAGAGCTTT GTCTTCACCA 
700
GAGGATGGAA TAGTTTCGTG AAGGAGAAGA ATCTCAAGGA GAAGGATGTT 
750
ATTGCCTTCT ACACTTGCGA TGTCCCGAAC AATGTGAAGA CATTAGAAGG 
800
TCAAAGAAAG AACTTCTTGA TGATCGATGT TCATTGCTTT TCAGACAACG 
850
GTTCCGTGGT AGCTGAGGAA GTAAGTATGA CGGTTCATGA CAGTTCAGTG 
900
CAAGTAAAGA AAACAGAAAA CTTGGTTAGC TCCATGTTAG AAGATAAAGA 
950
AACCAAATCA GAGGAGAACA AAGGAGGGTT TATGCTGTTT GGTGTAAGGA 
1000
TCGAATGTCC TTAG
1050

>AT1G50680.1 longest ORF length:337
MRLDDEPENA LVVSSSPKTV VASGNVKYKG VVQQQNGHWG AQIYADHKRI 
50
WLGTFKSADE AATAYDSASI KLRSFDANSH RNFPWSTITL NEPDFQNCYT 
100
TETVLNMIRD GSYQHKFRDF LRIRSQIVAS INIGGPKQAR GEVNQESDKC 
150
FSCTQLFQKE LTPSDVGKLN RLVIPKKYAV KYMPFISADQ SEKEEGEIVG 
200
SVEDVEVVFY DRAMRQWKFR YCYWKSSQSF VFTRGWNSFV KEKNLKEKDV 
250
IAFYTCDVPN NVKTLEGQRK NFLMIDVHCF SDNGSVVAEE VSMTVHDSSV 
300
QVKKTENLVS SMLEDKETKS EENKGGFMLF GVRIECP
350