fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G51070 bHLH115 basic Helix-Loop-Helix 115, basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1), basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.2)

>AT1G51070.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
HindIII A|AGCTT 212, 451, 574
StyI C|C[AT][AT]GG 82


Click here to view TAIR data

>AT1G51070.1 length:681
ATGGTGTCTC CGGAGAATAC GAACTGGCTT AGTGATTACC CTTTGATTGA 
50
AGGTGCTTTC TCTGATCAGA ACCCCACTTT CCCTTGGCAG ATAGATGGCT 
100
CAGCTACTGT CAGTGTTGAA GTGGATGGCT TCCTTTGTGA TGCAGATGTG 
150
ATCAAAGAAC CAAGTTCAAG GAAGAGGATC AAAACTGAAT CTTGCACTGG 
200
TTCTAACTCG AAAGCTTGTA GGGAGAAACA AAGACGTGAT AGACTAAATG 
250
ACAAGTTTAC GGAGTTGAGT TCCGTATTGG AACCTGGGAG AACTCCAAAA 
300
ACAGACAAGG TTGCTATTAT CAATGATGCA ATTCGCATGG TGAATCAAGC 
350
AAGAGATGAA GCGCAGAAAC TAAAGGACTT GAACTCAAGC CTCCAGGAGA 
400
AAATCAAGGA GTTGAAGGAT GAGAAGAACG AGCTGCGTGA TGAGAAACAG 
450
AAGCTTAAGG TCGAGAAGGA GAGAATCGAT CAGCAACTGA AAGCTATTAA 
500
GACACAGCCT CAGCCTCAAC CTTGTTTCTT ACCAAATCCG CAAACACTCT 
550
CTCAAGCTCA AGCTCCTGGA AGCAAGCTTG TCCCTTTCAC AACTTATCCC 
600
GGCTTTGCAA TGTGGCAATT CATGCCTCCT GCTGCTGTTG ATACCTCACA 
650
GGACCATGTC CTTCGTCCTC CAGTTGCTTA A
700

>AT1G51070.1 longest ORF length:226
MVSPENTNWL SDYPLIEGAF SDQNPTFPWQ IDGSATVSVE VDGFLCDADV 
50
IKEPSSRKRI KTESCTGSNS KACREKQRRD RLNDKFTELS SVLEPGRTPK 
100
TDKVAIINDA IRMVNQARDE AQKLKDLNSS LQEKIKELKD EKNELRDEKQ 
150
KLKVEKERID QQLKAIKTQP QPQPCFLPNP QTLSQAQAPG SKLVPFTTYP 
200
GFAMWQFMPP AAVDTSQDHV LRPPVA
250