fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G51140 bHLH122 basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1)

>AT1G51140.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, SacI, SalI, SmaI, SpeI, XhoI
Name Recognition sequence Cut positions
EcoRI G|AATTC 10
HindIII A|AGCTT 581, 748
PvuII CAG|CTG 518
StyI C|C[AT][AT]GG 800
XbaI T|CTAGA 625, 676, 783


Click here to view TAIR data

>AT1G51140.1 length:1140
ATGGAATCAG AATTCCAGCA ACATCACTTC CTTCTCCACG ATCATCAACA 
50
CCAGAGACCA AGAAACTCAG GATTGATTCG TTACCAATCA GCACCAAGTT 
100
CGTACTTTTC GAGTTTCGGT GAATCAATCG AAGAGTTTTT AGATCGACCC 
150
ACAAGTCCTG AAACTGAGCG AATCTTATCT GGCTTTTTAC AAACCACCGA 
200
CACAAGCGAC AACGTTGATA GTTTCCTTCA CCATACTTTT AACAGTGATG 
250
GAACTGAGAA GAAACCTCCG GAAGTTAAAA CAGAGGACGA AGATGCTGAA 
300
ATTCCGGTGA CTGCGACGGC GACGGCGATG GAGGTTGTTG TTTCCGGTGA 
350
TGGTGAAATC TCAGTGAATC CTGAAGTATC GATTGGGTAT GTGGCTTCGG 
400
TTTCGAGGAA TAAGAGACCA AGAGAGAAAG ATGATCGGAC TCCGGTGAAT 
450
AATCTAGCTC GTCATAATAG TTCACCGGCC GGATTATTTT CATCCATTGA 
500
TGTTGAAACA GCTTATGCAG CTGTAATGAA AAGTATGGGA GGTTTTGGAG 
550
GAAGTAATGT GATGAGTACA AGCAATACTG AAGCTTCGTC TCTTACTCCT 
600
AGAAGCAAGT TACTTCCTCC TACTTCTAGA GCGATGAGTC CGATCTCTGA 
650
GGTTGATGTT AAACCCGGTT TCTCGTCTAG ATTGCCTCCT CGGACGCTTT 
700
CCGGTGGGTT TAATCGTTCT TTTGGGAATG AAGGGTCTGC TTCTTCCAAG 
750
CTTACAGCTC TTGCTAGGAC CCAATCTGGA GGTCTAGATC AATACAAAAC 
800
CAAGGATGAG GATTCAGCAA GTAGACGTCC TCCTTTGGCA CATCACATGA 
850
GTTTGCCCAA GTCTTTATCA GATATTGAAC AGTTACTGTC AGATTCTATC 
900
CCATGTAAGA TCAGAGCCAA GCGGGGTTGT GCAACTCATC CTCGAAGCAT 
950
AGCCGAGAGG GTGAGAAGAA CCAAGATCAG TGAAAGAATG AGGAAGCTGC 
1000
AAGACCTTGT TCCAAACATG GACACGCAAA CAAACACAGC AGACATGTTG 
1050
GATCTTGCGG TTCAATACAT CAAGGACCTG CAAGAACAAG TGAAGGCGCT 
1100
CGAAGAGAGT CGGGCAAGAT GTAGATGCTC TAGTGCGTGA 
1150

>AT1G51140.1 longest ORF length:379
MESEFQQHHF LLHDHQHQRP RNSGLIRYQS APSSYFSSFG ESIEEFLDRP 
50
TSPETERILS GFLQTTDTSD NVDSFLHHTF NSDGTEKKPP EVKTEDEDAE 
100
IPVTATATAM EVVVSGDGEI SVNPEVSIGY VASVSRNKRP REKDDRTPVN 
150
NLARHNSSPA GLFSSIDVET AYAAVMKSMG GFGGSNVMST SNTEASSLTP 
200
RSKLLPPTSR AMSPISEVDV KPGFSSRLPP RTLSGGFNRS FGNEGSASSK 
250
LTALARTQSG GLDQYKTKDE DSASRRPPLA HHMSLPKSLS DIEQLLSDSI 
300
PCKIRAKRGC ATHPRSIAER VRRTKISERM RKLQDLVPNM DTQTNTADML 
350
DLAVQYIKDL QEQVKALEES RARCRCSSA
400