fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G51190 PLT2 PLETHORA 2, Integrase-type DNA-binding superfamily protein (.1)

>AT1G51190.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, HpaI, KpnI, NcoI, NheI, NotI, PacI, PvuII, SalI, SmaI
Name Recognition sequence Cut positions
BglII A|GATCT 948
EcoRI G|AATTC 3
EcoRV GAT|ATC 1333
HindIII A|AGCTT 992
NdeI CA|TATG 713
PstI CTGCA|G 428
SacI GAGCT|C 1218
SpeI A|CTAGT 466
StyI C|C[AT][AT]GG 135
XbaI T|CTAGA 1140
XhoI C|TCGAG 1215


Click here to view TAIR data

>AT1G51190.1 length:1707
ATGAATTCTA ACAACTGGCT CGCGTTCCCT CTATCACCAA CTCACTCTTC 
50
TTTGCCGCCT CACATTCACT CTTCACAAAA TTCTCATTTC AATCTAGGTT 
100
TGGTCAACGA CAATATCGAC AACCCTTTTC AAAACCAAGG ATGGAATATG 
150
ATCAATCCAC ATGGTGGAGG CGGCGAAGGT GGAGAGGTTC CAAAAGTGGC 
200
TGATTTCTTA GGAGTGAGCA AATCGGGGGA TCATCACACC GATCACAACC 
250
TCGTACCTTA TAACGACATT CATCAAACCA ACGCCTCCGA CTACTACTTT 
300
CAAACCAATA GCTTGTTACC TACAGTCGTC ACTTGTGCCT CTAATGCTCC 
350
TAATAATTAT GAGCTTCAAG AGAGTGCACA CAATTTGCAA TCTCTCACTC 
400
TCTCTATGGG AAGTACTGGA GCTGCCGCTG CAGAAGTCGC CACTGTGAAA 
450
GCCTCGCCGG CTGAGACTAG TGCCGATAAT AGTAGCAGCA CTACCAACAC 
500
AAGTGGAGGA GCCATCGTTG AGGCTACACC GAGACGGACT TTGGAAACTT 
550
TTGGACAACG AACCTCTATC TATCGTGGAG TTACAAGACA TAGATGGACC 
600
GGTAGATATG AAGCTCATCT TTGGGATAAT AGCTGTAGAA GAGAAGGACA 
650
ATCAAGGAAA GGAAGACAAG TCTACTTAGG TGGGTATGAC AAAGAAGAGA 
700
AAGCAGCCAG AGCATATGAT CTAGCTGCAC TTAAATATTG GGGTCCCTCT 
750
ACTACTACCA ACTTTCCGAT AACTAACTAC GAGAAGGAAG TAGAGGAGAT 
800
GAAAAACATG ACGAGACAAG AGTTTGTGGC TTCTATAAGA AGGAAAAGTA 
850
GCGGATTCTC GCGTGGTGCA TCCATGTATC GTGGAGTAAC AAGGCATCAT 
900
CAACATGGAA GATGGCAAGC AAGGATCGGC CGAGTTGCTG GAAACAAAGA 
950
TCTCTACTTG GGAACATTCA GCACGGAGGA AGAAGCAGCA GAAGCTTATG 
1000
ACATAGCTGC GATAAAGTTT CGAGGTCTAA ACGCGGTTAC AAACTTTGAG 
1050
ATAAATCGGT ATGATGTGAA AGCCATCCTG GAGAGCAACA CACTTCCTAT 
1100
AGGAGGTGGT GCGGCTAAAC GGCTCAAAGA AGCTCAAGCT CTAGAATCAT 
1150
CAAGAAAACG AGAGGAAATG ATAGCCCTCG GATCAAATTT CCATCAATAT 
1200
GGTGCAGCGA GCGGCTCGAG CTCTGTTGCT TCCAGCTCTA GGCTTCAGCT 
1250
TCAACCTTAC CCTCTAAGCA TTCAACAACC TTTTGAGCAT CTTCATCATC 
1300
ATCAGCCTTT ACTTACTCTA CAGAACAACA ACGATATCTC TCAGTATCAT 
1350
GATTCCTTTA GTTACATTCA GACGCAGCTT CATCTTCACC AACAACAAAC 
1400
CAACAATTAC TTGCAGTCTT CTAGTCACAC TTCACAGCTC TACAATGCTT 
1450
ATCTTCAGAG TAACCCTGGT CTGCTTCATG GATTTGTCTC TGATAATAAC 
1500
AACACTTCAG GGTTTCTTGG AAACAATGGG ATTGGTATTG GGTCAAGCTC 
1550
TACCGTTGGA TCATCGGCTG AGGAAGAGTT TCCAGCCGTG AAAGTCGATT 
1600
ACGATATGCC TCCTTCCGGT GGAGCTACAG GGTATGGAGG ATGGAATAGT 
1650
GGAGAGTCTG CTCAAGGATC GAATCCAGGA GGTGTTTTCA CGATGTGGAA 
1700
TGAATAA
1750

>AT1G51190.1 longest ORF length:568
MNSNNWLAFP LSPTHSSLPP HIHSSQNSHF NLGLVNDNID NPFQNQGWNM 
50
INPHGGGGEG GEVPKVADFL GVSKSGDHHT DHNLVPYNDI HQTNASDYYF 
100
QTNSLLPTVV TCASNAPNNY ELQESAHNLQ SLTLSMGSTG AAAAEVATVK 
150
ASPAETSADN SSSTTNTSGG AIVEATPRRT LETFGQRTSI YRGVTRHRWT 
200
GRYEAHLWDN SCRREGQSRK GRQVYLGGYD KEEKAARAYD LAALKYWGPS 
250
TTTNFPITNY EKEVEEMKNM TRQEFVASIR RKSSGFSRGA SMYRGVTRHH 
300
QHGRWQARIG RVAGNKDLYL GTFSTEEEAA EAYDIAAIKF RGLNAVTNFE 
350
INRYDVKAIL ESNTLPIGGG AAKRLKEAQA LESSRKREEM IALGSNFHQY 
400
GAASGSSSVA SSSRLQLQPY PLSIQQPFEH LHHHQPLLTL QNNNDISQYH 
450
DSFSYIQTQL HLHQQQTNNY LQSSSHTSQL YNAYLQSNPG LLHGFVSDNN 
500
NTSGFLGNNG IGIGSSSTVG SSAEEEFPAV KVDYDMPPSG GATGYGGWNS 
550
GESAQGSNPG GVFTMWNE
600