fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G51220 AtWIP5, WIP5 WIP domain protein 5 (.1)

>AT1G51220.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 465
EcoRV GAT|ATC 1000
HindIII A|AGCTT 856


Click here to view TAIR data

>AT1G51220.1 length:1014
ATGTCTAATC CAGCTTGTTC GAATCTCTTC AACAATGGAT GTGACCATAA 
50
TAGCTTCAAC TATTCCACTT CTCTCTCTTA CATTTACAAC TCTCACGGTA 
100
GCTACTATTA CTCTAATACC ACAAACCCTA ATTACATTAA TCATACTCAT 
150
ACCACTTCCA CTTCCCCTAA CTCACCCCCA CTAAGAGAAG CTCTTCCTCT 
200
TCTTAGCTTA AGCCCCATAA GGCACCAAGA ACAACAAGAC CAACACTATT 
250
TCATGGACAC CCATCAAATT AGCTCTTCAA ACTTTCTTGA TGATCCTCTT 
300
GTGACTGTGG ATCTTCATCT AGGGTTACCA AACTACGGTG TTGGTGAGAG 
350
CATTAGGAGC AATATTGCTC CTGATGCAAC CACGGACGAG CAAGATCAAG 
400
ATCATGACCG AGGAGTAGAA GTCACAGTTG AGTCCCACCT TGATGATGAT 
450
GATGATCATC ATGGAGATCT ACACAGAGGT CATCACTATT GGATTCCTAC 
500
TCCTTCTCAG ATTTTGATTG GTCCTACACA GTTCACTTGT CCTCTTTGCT 
550
TCAAGACATT CAACAGATAC AACAACATGC AGATGCACAT GTGGGGACAC 
600
GGCTCACAAT ACAGAAAGGG ACCAGAATCC TTAAGAGGAA CCCAACCAAC 
650
AGGAATGCTA AGACTACCAT GTTTCTGCTG TGCACCCGGT TGCAAGAACA 
700
ACATTGACCA CCCACGAGCC AAGCCTCTTA AGGACTTTCG AACCCTCCAA 
750
ACACATTACA AACGTAAACA TGGGTCTAAA CCATTTGCTT GTCGTATGTG 
800
TGGTAAGGCC TTTGCAGTGA AAGGAGATTG GAGAACGCAT GAGAAGAATT 
850
GTGGAAAGCT TTGGTATTGC TCTTGTGGCT CGGATTTTAA GCACAAGAGG 
900
TCGCTTAAGG ACCATGTCAA GGCCTTTGGA AATGGTCATG TTCCTTGTGG 
950
GATTGATAGT TTTGGAGGAG ATCATGAGGA CTACTATGAT GCTGCTTCTG 
1000
ATATCGAGCA ATAA
1050

>AT1G51220.1 longest ORF length:337
MSNPACSNLF NNGCDHNSFN YSTSLSYIYN SHGSYYYSNT TNPNYINHTH 
50
TTSTSPNSPP LREALPLLSL SPIRHQEQQD QHYFMDTHQI SSSNFLDDPL 
100
VTVDLHLGLP NYGVGESIRS NIAPDATTDE QDQDHDRGVE VTVESHLDDD 
150
DDHHGDLHRG HHYWIPTPSQ ILIGPTQFTC PLCFKTFNRY NNMQMHMWGH 
200
GSQYRKGPES LRGTQPTGML RLPCFCCAPG CKNNIDHPRA KPLKDFRTLQ 
250
THYKRKHGSK PFACRMCGKA FAVKGDWRTH EKNCGKLWYC SCGSDFKHKR 
300
SLKDHVKAFG NGHVPCGIDS FGGDHEDYYD AASDIEQ
350