fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G51600 GATA28, TIFY2A, ZML2 GATA TRANSCRIPTION FACTOR 28, ZIM-LIKE 2 (.1.2)

>AT1G51600.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 659
HpaI GTT|AAC 249
SalI G|TCGAC 220
StyI C|C[AT][AT]GG 366


Click here to view TAIR data

>AT1G51600.1 length:909
ATGGATGACC TACATGGAAG CAATGCTCGA ATGCACATTA GAGAAGCTCA 
50
AGATCCAATG CATGTGCAAT TTGAACATCA TGCTTTGCAT CACATCCACA 
100
ATGGAAGCGG TATGGTTGAT GACCAGGCTG ATGATGGCAA TGCTGGTGGG 
150
ATGAGTGAGG GTGTGGAAAC AGACATTCCT TCTCACCCTG GAAATGTAAC 
200
TGACAATCGT GGTGAAGTGG TCGACCGTGG TAGTGAACAA GGAGATCAGT 
250
TAACATTGTC TTTTCAGGGC CAAGTCTACG TTTTTGACAG TGTCTTGCCT 
300
GAGAAGGTTC AAGCTGTGCT TCTATTATTG GGTGGTCGTG AATTACCTCA 
350
GGCAGCCCCT CCTGGCCTAG GATCACCTCA TCAGAACAAC AGAGTATCGA 
400
GTTTACCTGG TACTCCTCAA AGGTTTAGTA TTCCGCAGCG ATTAGCTTCT 
450
TTGGTCAGAT TTCGAGAGAA ACGGAAAGGA AGGAATTTTG ATAAGAAGAT 
500
TCGGTATACA GTCCGCAAGG AGGTAGCTTT GAGGATGCAA CGCAATAAAG 
550
GTCAGTTCAC ATCTGCCAAG TCAAACAATG ATGAAGCTGC ATCTGCTGGA 
600
TCTAGCTGGG GGTCGAATCA AACCTGGGCC ATAGAAAGTA GTGAGGCTCA 
650
GCATCAAGAG ATCTCATGTC GGCACTGTGG AATTGGCGAG AAGTCAACTC 
700
CAATGATGCG ACGTGGACCT GCCGGGCCAA GAACACTTTG CAATGCATGT 
750
GGACTTATGT GGGCAAACAA GGGTGCTTTT AGGGACTTAT CCAAAGCCTC 
800
TCCTCAAACA GCCCAGAATC TTCCTTTAAA TAAGAATGAA GATGCAAATC 
850
TTGAGACTGA TCATCAAATA ATGATAACAG TGGCCAATGA CATAAGCAAC 
900
TCACAGTGA
950

>AT1G51600.1 longest ORF length:302
MDDLHGSNAR MHIREAQDPM HVQFEHHALH HIHNGSGMVD DQADDGNAGG 
50
MSEGVETDIP SHPGNVTDNR GEVVDRGSEQ GDQLTLSFQG QVYVFDSVLP 
100
EKVQAVLLLL GGRELPQAAP PGLGSPHQNN RVSSLPGTPQ RFSIPQRLAS 
150
LVRFREKRKG RNFDKKIRYT VRKEVALRMQ RNKGQFTSAK SNNDEAASAG 
200
SSWGSNQTWA IESSEAQHQE ISCRHCGIGE KSTPMMRRGP AGPRTLCNAC 
250
GLMWANKGAF RDLSKASPQT AQNLPLNKNE DANLETDHQI MITVANDISN 
300
SQ
350