Locus |
Common name |
Short description |
AT1G51700 |
ADOF1, AtDof1. 7 |
DOF zinc finger protein 1 (.1) |
>AT1G51700.1 CDS map
>>Show genomic map

Uncut enzymes: Acc65I, AccI, AccIII(BspMII), AciI, AclI, AfeI, AflII, AgeI, AhdI, AlwI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvaI, AvrII, BaeI, BalI, BamHI, BanI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BglI, BglII, BlpI, BmrI, BpmI, BsaBI, BsaI, BsaJI, BsaXI, BseRI, BsgI, BsiEI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, BspDI, BspEI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrFI, BsrGI, BssHII, BssSI, BstAPI, BstBI, BstXI, BstZ17I, Bsu36I, BtgI, BtrI, BtsI, Cac8I, Cfr10I, ClaI, DraI, DraIII, DrdI, EaeI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HaeIII, HgaI, HhaI, HinP1I, HincII, HindIII, HpaI, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, MseI, MslI, MspA1I, MwoI, NaeI, , NarI, NcoI, NdeI, NgoMIV, NheI, NotI, NruI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PflMI, PleI, PmeI, PpuMI, PshAI, PsiI, PspOMI, PstI, PvuI, PvuII, RsrII, SacI, SacII, SalI, SapI, SbfI, ScaI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, SspI, StuI, StyI, SwaI, TliI, TspRI, Tth111I, XbaI, XcmI, XhoI, XmaI, XmnI
Name |
Recognition sequence |
Cut positions |
AatII
| GACGT|C |
12 |
AccII(FnuDII)
| CG|CG |
486 |
AflIII
| A|CPuPyGT |
542 |
AluI
| AG|CT |
93, 556 |
AlwNI
| CAGNNN|CTG |
7 |
ApoI
| Pu|AATTPy |
130 |
AvaII
| G|G[AT]CC |
328 |
BclI
| T|GATCA |
318 |
BfaI
| C|TAG |
279 |
BsaAI
| PyAC|GTPu |
543 |
BsaHI
| GPu|CGPyC |
12, 444 |
BsaWI
| [AT]|CCGG[AT] |
265 |
BsiHKAI
| G[AT]GC[AT]|C |
212 |
BslI
| CCNNNNN|NNGG |
234 |
Bsp1286I
| G[GAT]GC[CAT]|C |
212 |
BsrI
| ACTGGN| |
197 |
BssKI
| |CCNGG |
331, 382, 481, 498 |
BstEII
| G|GTNACC |
399, 495 |
BstF5I
| GGATGNN| |
387 |
BstNI
| CC|[AT]GG |
498 |
BstUI
| CG|CG |
486 |
BstYI
| Pu|GATCPy |
6, 411 |
DdeI
| C|TNAG |
307, 554 |
DpnI
| GA-CH3|TC |
5, 261, 317, 410 |
DpnII
| |GATC |
5, 261, 317, 410 |
Fnu4HI
| GC|NGC |
18 |
HinfI
| G|ANTC |
114, 374, 477 |
HpaII
| C|CGG |
264, 330, 382, 480 |
Hpy188I
| TCN|GA |
8, 245, 336, 377, 413 |
Hpy99I
| CG[AT]CG| |
52, 189, 230, 302, 445 |
HpyCH4III
| ACN|GT |
184, 300 |
HpyCH4IV
| A|CGT |
11, 542 |
HpyCH4V
| TG|CA |
0, 176, 453 |
MboI
| |GATC |
5, 261, 317, 410 |
MspI
| C|CGG |
264, 330, 382, 480 |
N.BstNBI
| GAGTCNNNN|N |
482 |
NciI
| CC|[CG]GG |
331, 382, 481 |
NlaIII
| CATG| |
323 |
NlaIV
| GGN|NCC |
328 |
PmlI
| CAC|GTG |
543 |
PspGI
| |CC[AT]GG |
498 |
RsaI
| GT|AC |
524 |
Sau3AI
| |GATC |
5, 261, 317, 410 |
Sau96I
| G|GNCC |
328 |
ScrFI
| CC|NGG |
331, 382, 481, 498 |
SexAI
| A|CC[AT]GGT |
499 |
SmlI
| C|TPyPuAG |
289 |
Taqƒ¿I
| T|CGA |
38, 446 |
TfiI
| G|A[AT]TC |
374 |
TseI
| G|C[AT]GC |
18 |
Tsp45I
| |GT[CG]AC |
112, 158, 169 |
Tsp509I
| |AATT |
129, 146, 578 |
Click here to view TAIR data
>AT1G51700.1 length:585
ATGCAGGATC TGACGTCAGC AGCAGCGTAT TATCATCAGT CGATGATGAT | 50 |
GACGACGGCG AAACAGAACC AACCAGAGTT ACCAGAACAA GAACAGCTAA | 100 |
AGTGTCCTCG CTGTGACTCA CCTAACACTA AATTCTGTTA CTACAACAAT | 150 |
TACAATCTGT CACAGCCCCG TCACTTTTGC AAAAACTGTC GTCGTTACTG | 200 |
GACTAAAGGC GGTGCTCTTC GTAACATCCC CGTCGGTGGT GGAACTCGGA | 250 |
AAAGCAACAA ACGATCCGGT TCTTCTCCGT CTAGTAATCT CAAGAACCAA | 300 |
ACCGTCGCTG AGAAACCTGA TCATCATGGG TCCGGGTCAG AAGAAAAAGA | 350 |
AGAGAGAGTT TCGGGTCAAG AAATGAATCC GACCCGGATG TTATACGGGT | 400 |
TACCAGTTGG AGATCCGAAT GGTGCGAGTT TTAGTTCGTT GTTGGCGTCG | 450 |
AATATGCAGA TGGGTGGGCT TGTTTACGAG TCCGGGTCGC GTTGGTTACC | 500 |
AGGTATGGAT TTGGGTTTGG GTTCGGTACG GAGGAGTGAT GACACGTGGA | 550 |
CTGACTTAGC TATGAACAGA ATGGAGAAGA ATTGA | 600 |
>AT1G51700.1 longest ORF length:194
MQDLTSAAAY YHQSMMMTTA KQNQPELPEQ EQLKCPRCDS PNTKFCYYNN | 50 |
YNLSQPRHFC KNCRRYWTKG GALRNIPVGG GTRKSNKRSG SSPSSNLKNQ | 100 |
TVAEKPDHHG SGSEEKEERV SGQEMNPTRM LYGLPVGDPN GASFSSLLAS | 150 |
NMQMGGLVYE SGSRWLPGMD LGLGSVRRSD DTWTDLAMNR MEKN | 200 |
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