fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G51700 ADOF1, AtDof1. 7 DOF zinc finger protein 1 (.1)

>AT1G51700.1 CDS map

>>Show genomic map




Uncut enzymes: Acc65I, AccI, AccIII(BspMII), AciI, AclI, AfeI, AflII, AgeI, AhdI, AlwI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvaI, AvrII, BaeI, BalI, BamHI, BanI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BglI, BglII, BlpI, BmrI, BpmI, BsaBI, BsaI, BsaJI, BsaXI, BseRI, BsgI, BsiEI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, BspDI, BspEI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrFI, BsrGI, BssHII, BssSI, BstAPI, BstBI, BstXI, BstZ17I, Bsu36I, BtgI, BtrI, BtsI, Cac8I, Cfr10I, ClaI, DraI, DraIII, DrdI, EaeI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HaeIII, HgaI, HhaI, HinP1I, HincII, HindIII, HpaI, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, MseI, MslI, MspA1I, MwoI, NaeI, , NarI, NcoI, NdeI, NgoMIV, NheI, NotI, NruI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PflMI, PleI, PmeI, PpuMI, PshAI, PsiI, PspOMI, PstI, PvuI, PvuII, RsrII, SacI, SacII, SalI, SapI, SbfI, ScaI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, SspI, StuI, StyI, SwaI, TliI, TspRI, Tth111I, XbaI, XcmI, XhoI, XmaI, XmnI
Name Recognition sequence Cut positions
AatII GACGT|C 12
AccII(FnuDII) CG|CG 486
AflIII A|CPuPyGT 542
AluI AG|CT 93, 556
AlwNI CAGNNN|CTG 7
ApoI Pu|AATTPy 130
AvaII G|G[AT]CC 328
BclI T|GATCA 318
BfaI C|TAG 279
BsaAI PyAC|GTPu 543
BsaHI GPu|CGPyC 12, 444
BsaWI [AT]|CCGG[AT] 265
BsiHKAI G[AT]GC[AT]|C 212
BslI CCNNNNN|NNGG 234
Bsp1286I G[GAT]GC[CAT]|C 212
BsrI ACTGGN| 197
BssKI |CCNGG 331, 382, 481, 498
BstEII G|GTNACC 399, 495
BstF5I GGATGNN| 387
BstNI CC|[AT]GG 498
BstUI CG|CG 486
BstYI Pu|GATCPy 6, 411
DdeI C|TNAG 307, 554
DpnI GA-CH3|TC 5, 261, 317, 410
DpnII |GATC 5, 261, 317, 410
Fnu4HI GC|NGC 18
HinfI G|ANTC 114, 374, 477
HpaII C|CGG 264, 330, 382, 480
Hpy188I TCN|GA 8, 245, 336, 377, 413
Hpy99I CG[AT]CG| 52, 189, 230, 302, 445
HpyCH4III ACN|GT 184, 300
HpyCH4IV A|CGT 11, 542
HpyCH4V TG|CA 0, 176, 453
MboI |GATC 5, 261, 317, 410
MspI C|CGG 264, 330, 382, 480
N.BstNBI GAGTCNNNN|N 482
NciI CC|[CG]GG 331, 382, 481
NlaIII CATG| 323
NlaIV GGN|NCC 328
PmlI CAC|GTG 543
PspGI |CC[AT]GG 498
RsaI GT|AC 524
Sau3AI |GATC 5, 261, 317, 410
Sau96I G|GNCC 328
ScrFI CC|NGG 331, 382, 481, 498
SexAI A|CC[AT]GGT 499
SmlI C|TPyPuAG 289
Taqƒ¿I T|CGA 38, 446
TfiI G|A[AT]TC 374
TseI G|C[AT]GC 18
Tsp45I |GT[CG]AC 112, 158, 169
Tsp509I |AATT 129, 146, 578


Click here to view TAIR data

>AT1G51700.1 length:585
ATGCAGGATC TGACGTCAGC AGCAGCGTAT TATCATCAGT CGATGATGAT 
50
GACGACGGCG AAACAGAACC AACCAGAGTT ACCAGAACAA GAACAGCTAA 
100
AGTGTCCTCG CTGTGACTCA CCTAACACTA AATTCTGTTA CTACAACAAT 
150
TACAATCTGT CACAGCCCCG TCACTTTTGC AAAAACTGTC GTCGTTACTG 
200
GACTAAAGGC GGTGCTCTTC GTAACATCCC CGTCGGTGGT GGAACTCGGA 
250
AAAGCAACAA ACGATCCGGT TCTTCTCCGT CTAGTAATCT CAAGAACCAA 
300
ACCGTCGCTG AGAAACCTGA TCATCATGGG TCCGGGTCAG AAGAAAAAGA 
350
AGAGAGAGTT TCGGGTCAAG AAATGAATCC GACCCGGATG TTATACGGGT 
400
TACCAGTTGG AGATCCGAAT GGTGCGAGTT TTAGTTCGTT GTTGGCGTCG 
450
AATATGCAGA TGGGTGGGCT TGTTTACGAG TCCGGGTCGC GTTGGTTACC 
500
AGGTATGGAT TTGGGTTTGG GTTCGGTACG GAGGAGTGAT GACACGTGGA 
550
CTGACTTAGC TATGAACAGA ATGGAGAAGA ATTGA
600

>AT1G51700.1 longest ORF length:194
MQDLTSAAAY YHQSMMMTTA KQNQPELPEQ EQLKCPRCDS PNTKFCYYNN 
50
YNLSQPRHFC KNCRRYWTKG GALRNIPVGG GTRKSNKRSG SSPSSNLKNQ 
100
TVAEKPDHHG SGSEEKEERV SGQEMNPTRM LYGLPVGDPN GASFSSLLAS 
150
NMQMGGLVYE SGSRWLPGMD LGLGSVRRSD DTWTDLAMNR MEKN
200