fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G52890 ANAC019 NAC domain containing protein 19 (.1)

>AT1G52890.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRV, NdeI, NheI, NotI, PacI, PstI, SacI, SalI, SmaI, SpeI, XbaI
Name Recognition sequence Cut positions
BglII A|GATCT 147
EcoRI G|AATTC 538
HindIII A|AGCTT 344
HpaI GTT|AAC 24
KpnI GGTAC|C 771
NcoI C|CATGG 166
PvuII CAG|CTG 107
StyI C|C[AT][AT]GG 166, 223
XhoI C|TCGAG 808


Click here to view TAIR data

>AT1G52890.1 length:954
ATGGGTATCC AAGAAACTGA CCCGTTAACG CAATTGAGTT TACCACCGGG 
50
TTTCCGATTT TACCCGACCG ATGAAGAGCT TATGGTTCAA TATCTCTGTA 
100
GAAAAGCAGC TGGTTACGAT TTCTCTCTTC AGCTCATCGC CGAAATAGAT 
150
CTTTACAAAT TCGATCCATG GGTTTTACCA AATAAAGCAT TATTTGGAGA 
200
AAAAGAATGG TATTTTTTTA GTCCTAGGGA TAGAAAATAT CCAAACGGGT 
250
CAAGACCTAA CCGGGTTGCC GGATCGGGTT ATTGGAAAGC TACGGGTACG 
300
GATAAAATAA TCTCGACGGA AGGACAAAGA GTTGGTATTA AAAAAGCTTT 
350
GGTGTTTTAC ATCGGAAAAG CTCCTAAAGG TACTAAAACC AATTGGATCA 
400
TGCATGAGTA TCGTCTCATT GAACCTTCTC GTAGAAACGG AAGCACTAAG 
450
TTGGATGATT GGGTTCTATG TCGAATATAC AAGAAGCAAT CAAGTGCACA 
500
AAAACAAGTT TACGATAATG GAATCGCGAA TGCTAGAGAA TTCAGCAACA 
550
ACGGTACTTC GTCCACGACG TCGTCTTCTT CTCACTTTGA AGACGTTCTT 
600
GATTCGTTTC ATCAAGAGAT CGACAACAGA AATTTCCAGT TTTCTAACCC 
650
AAACCGCATC TCGTCGCTCA GACCGGACTT AACCGAACAG AAAACCGGGT 
700
TCCACGGTCT TGCGGATACT TCTAACTTCG ATTGGGCTAG TTTTGCCGGT 
750
AATGTTGAGC ATAATAACTC GGTACCGGAA CTCGGAATGA GTCATGTTGT 
800
TCCTAATCTC GAGTACAACT GTGGCTACCT GAAGACGGAG GAGGAAGTCG 
850
AGAGCAGTCA CGGGTTTAAT AACTCGGGCG AGTTAGCTCA AAAGGGTTAT 
900
GGTGTTGACT CGTTTGGGTA TTCGGGGCAA GTTGGTGGGT TTGGGTTTAT 
950
GTGA
1000

>AT1G52890.1 longest ORF length:317
MGIQETDPLT QLSLPPGFRF YPTDEELMVQ YLCRKAAGYD FSLQLIAEID 
50
LYKFDPWVLP NKALFGEKEW YFFSPRDRKY PNGSRPNRVA GSGYWKATGT 
100
DKIISTEGQR VGIKKALVFY IGKAPKGTKT NWIMHEYRLI EPSRRNGSTK 
150
LDDWVLCRIY KKQSSAQKQV YDNGIANARE FSNNGTSSTT SSSSHFEDVL 
200
DSFHQEIDNR NFQFSNPNRI SSLRPDLTEQ KTGFHGLADT SNFDWASFAG 
250
NVEHNNSVPE LGMSHVVPNL EYNCGYLKTE EEVESSHGFN NSGELAQKGY 
300
GVDSFGYSGQ VGGFGFM
350