fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G53160 SPL4 squamosa promoter binding protein-like 4 (.1.2)

>AT1G53160.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, SalI, SmaI, SpeI, StyI, XhoI
Name Recognition sequence Cut positions
PvuII CAG|CTG 179
SacI GAGCT|C 381
XbaI T|CTAGA 121


Click here to view TAIR data

>AT1G53160.1 length:525
ATGGAGGGTA AGAGATCACA AGGACAAGGT TACATGAAAA AGAAGTCTTA 
50
CCTTGTGGAA GAAGATATGG AGACTGATAC GGATGAAGAA GAGGAAGTAG 
100
GTAGGGATAG AGTTAGAGGG TCTAGAGGTA GCATCAATCG TGGTGGCTCG 
150
TTGCGGCTTT GCCAAGTAGA TAGATGCACA GCTGATATGA AAGAGGCAAA 
200
ACTGTATCAC CGGAGACACA AAGTGTGTGA AGTTCATGCA AAGGCATCTT 
250
CTGTCTTTCT CTCAGGACTT AACCAACGCT TTTGTCAACA ATGCAGTAGG 
300
TTTCATGACC TCCAAGAGTT TGATGAAGCT AAGAGAAGTT GCAGGAGGCG 
350
CTTAGCTGGA CACAATGAGC GAAGAAGGAA GAGCTCTGGT GAGAGTACTT 
400
ATGGAGAAGG ATCAGGTCGG AGAGGAATCA ATGGTCAGGT GGTGATGCAG 
450
AATCAAGAAA GATCAAGGGT AGAGATGACA CTTCCTATGC CAAACTCATC 
500
ATTCAAGCGA CCACAGATTA GATAG
550

>AT1G53160.1 longest ORF length:174
MEGKRSQGQG YMKKKSYLVE EDMETDTDEE EEVGRDRVRG SRGSINRGGS 
50
LRLCQVDRCT ADMKEAKLYH RRHKVCEVHA KASSVFLSGL NQRFCQQCSR 
100
FHDLQEFDEA KRSCRRRLAG HNERRRKSSG ESTYGEGSGR RGINGQVVMQ 
150
NQERSRVEMT LPMPNSSFKR PQIR
200