Locus |
Common name |
Short description |
AT1G53170 |
ATERF8, ATERF-8 |
ETHYLENE RESPONSE ELEMENT BINDING FACTOR 4, ethylene response factor 8 (.1) |
>AT1G53170.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, EcoRI, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SmaI, SpeI, XbaI
Name |
Recognition sequence |
Cut positions |
BglII
| A|GATCT |
522 |
EcoRV
| GAT|ATC |
507 |
NcoI
| C|CATGG |
14, 112 |
SacI
| GAGCT|C |
346 |
SalI
| G|TCGAC |
301 |
StyI
| C|C[AT][AT]GG |
14, 112 |
XhoI
| C|TCGAG |
158, 343 |
Click here to view TAIR data
>AT1G53170.1 length:558
ATGCCCAACA TCACCATGGG TTTGAAACCC GACCCGGTTG CTCCAACGAA | 50 |
CCCGACTCAT CATGAGAGTA ATGCTGCCAA AGAGATTCGT TACAGAGGCG | 100 |
TTAGGAAACG TCCATGGGGA AGATACGCCG CTGAGATCCG AGATCCGGTT | 150 |
AAGAAAACTC GAGTCTGGCT CGGTACGTTC GACACCGCTC AGCAGGCGGC | 200 |
GCGTGCTTAC GACGCAGCCG CGCGTGACTT TCGTGGTGTT AAGGCTAAGA | 250 |
CCAATTTCGG TGTTATCGTT GGTAGTAGTC CTACTCAGAG TAGCACCGTC | 300 |
GTCGACTCTC CCACGGCGGC ACGGTTTATA ACACCTCCGC ACCTCGAGCT | 350 |
CAGCTTAGGC GGCGGCGGCG CGTGTCGTCG TAAGATCCCG CTTGTGCATC | 400 |
CGGTTTACTA CTATAACATG GCGACGTATC CAAAGATGAC GACGTGTGGT | 450 |
GTCCAGAGCG AGTCTGAAAC GTCGTCGGTC GTTGATTTCG AAGGTGGAGC | 500 |
TGGGAAGATA TCTCCGCCGT TAGATCTGGA TCTTAACTTA GCTCCTCCGG | 550 |
CGGAATAG | 600 |
>AT1G53170.1 longest ORF length:185
MPNITMGLKP DPVAPTNPTH HESNAAKEIR YRGVRKRPWG RYAAEIRDPV | 50 |
KKTRVWLGTF DTAQQAARAY DAAARDFRGV KAKTNFGVIV GSSPTQSSTV | 100 |
VDSPTAARFI TPPHLELSLG GGGACRRKIP LVHPVYYYNM ATYPKMTTCG | 150 |
VQSESETSSV VDFEGGAGKI SPPLDLDLNL APPAE | 200 |
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