|
|
|
|
|
|
|
|
| Locus | Common name | Short description |
| AT1G53910 | RAP2.12 | related to AP2 12 (.1.2.3) |
>AT1G53910.3 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, SacI, SalI, SmaI, SpeI, XbaI, XhoI
| Name | Recognition sequence | Cut positions |
| PstI | CTGCA|G | 491 |
| PvuII | CAG|CTG | 461 |
| StyI | C|C[AT][AT]GG | 168, 388, 421 |
Click here to view TAIR data
>AT1G53910.3 length:1071
ATGTGTGGAG GAGCTATAAT ATCCGATTTC ATTCCACCGC CGAGGTCTCG | 50 |
CCGTGTTACT AGCGAGTTTA TTTGGCCGGA TCTGAAGAAG AATTTGAAAG | 100 |
GATCGAAGAA AAGCTCGAAG AATCGTTCGA ATTTCTTCGA TTTTGACGCT | 150 |
GAGTTCGAAG CTGATTTCCA AGGTTTCAAA GATGATTCGT CTATCGATTG | 200 |
CGATGATGAT TTCGACGTCG GTGATGTTTT CGCCGATGTG AAACCATTCG | 250 |
TTTTCACTTC GACTCCAAAA CCCGCCGTCT CCGCCGCTGC GGAAGTTTTT | 300 |
GGTAAGAAAG TTACTGGCTT GGATGGGGAC GCTGAGAAAT CTGCAAATAG | 350 |
GAAGAGGAAG AATCAGTACC GAGGGATTAG GCAACGTCCT TGGGGAAAAT | 400 |
GGGCTGCTGA GATACGTGAT CCAAGGGAAG GTGCTAGAAT CTGGCTTGGA | 450 |
ACGTTCAAGA CAGCTGAGGA AGCTGCTAGA GCTTACGATG CTGCAGCGCG | 500 |
GAGAATCCGT GGATCTAAAG CTAAGGTGAA TTTCCCTGAA GAAAACATGA | 550 |
AGGCTAATTC TCAGAAACGC TCTGTGAAGG CTAATCTTCA GAAACCAGTG | 600 |
GCTAAACCTA ACCCTAACCC AAGTCCAGCT TTGGTTCAGA ACTCGAACAT | 650 |
CTCCTTTGAA AATATGTGTT TCATGGAGGA GAAACACCAA GTGAGCAACA | 700 |
ACAACAACAA CCAGTTTGGG ATGACAAACT CCGTTGATGC TGGATGTAAT | 750 |
GGGTATCAGT ATTTCAGCTC TGACCAGGGT AGTAATTCTT TCGATTGTTC | 800 |
GGAGTTTGGT TGGAGCGATC AAGCTCCGAT AACTCCCGAC ATCTCTTCTG | 850 |
CGGTTATCAA CAACAACAAC TCAGCTCTGT TCTTTGAGGA AGCCAATCCA | 900 |
GCTAAGAAGC TCAAGTCTAT GGATTTCGAG ACACCTTACA ACAACACTGA | 950 |
ATGGGACGCT TCACTGGATT TCCTCAACGA AGATGCTGTA ACGACTCAGG | 1000 |
ACAATGGTGC AAACCCTATG GACCTATGGA GTATTGATGA AATTCATTCC | 1050 |
ATGATTGGAG GAGTCTTCTG A | 1100 |
>AT1G53910.3 longest ORF length:356
MCGGAIISDF IPPPRSRRVT SEFIWPDLKK NLKGSKKSSK NRSNFFDFDA | 50 |
EFEADFQGFK DDSSIDCDDD FDVGDVFADV KPFVFTSTPK PAVSAAAEVF | 100 |
GKKVTGLDGD AEKSANRKRK NQYRGIRQRP WGKWAAEIRD PREGARIWLG | 150 |
TFKTAEEAAR AYDAAARRIR GSKAKVNFPE ENMKANSQKR SVKANLQKPV | 200 |
AKPNPNPSPA LVQNSNISFE NMCFMEEKHQ VSNNNNNQFG MTNSVDAGCN | 250 |
GYQYFSSDQG SNSFDCSEFG WSDQAPITPD ISSAVINNNN SALFFEEANP | 300 |
AKKLKSMDFE TPYNNTEWDA SLDFLNEDAV TTQDNGANPM DLWSIDEIHS | 350 |
MIGGVF | 400 |