Locus |
Common name |
Short description |
AT1G54830 |
NF-YC3 |
"nuclear factor Y, subunit C3", nuclear factor Y, subunit C3 (.1.2.3) |
>AT1G54830.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BglII, EcoRI, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, SacI, SalI, SpeI, StyI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
BamHI
| G|GATCC |
639 |
EcoRV
| GAT|ATC |
382 |
PvuII
| CAG|CTG |
494 |
SmaI
| CCC|GGG |
549, 570 |
Click here to view TAIR data
>AT1G54830.1 length:654
ATGGATCAAC AAGGACAATC ATCAGCTATG AACTATGGTT CAAACCCATA | 50 |
TCAAACCAAC GCCATGACCA CTACACCAAC CGGTTCAGAC CATCCAGCTT | 100 |
ACCATCAGAT CCACCAGCAA CAACAACAAC AGCTCACTCA ACAGCTTCAA | 150 |
TCTTTCTGGG AGACTCAATT CAAAGAGATT GAGAAAACCA CTGATTTCAA | 200 |
GAACCATAGC CTTCCATTGG CAAGAATCAA GAAAATCATG AAAGCTGATG | 250 |
AAGATGTGCG TATGATCTCG GCCGAGGCGC CTGTTGTGTT CGCCAGGGCC | 300 |
TGCGAGATGT TTATTCTGGA GCTTACGTTA AGGTCTTGGA ACCATACTGA | 350 |
GGAGAACAAG AGAAGGACGT TGCAGAAGAA TGATATCGCG GCTGCGGTGA | 400 |
CTAGAACTGA TATTTTTGAT TTTCTTGTGG ATATTGTTCC TCGGGAGGAT | 450 |
CTTCGTGATG AAGTCTTGGG TGGTGTTGGT GCTGAAGCTG CTACAGCTGC | 500 |
GGGTTATCCG TATGGATACT TGCCTCCTGG AACAGCTCCA ATTGGGAACC | 550 |
CGGGAATGGT TATGGGTAAC CCGGGCGCGT ATCCGCCGAA CCCGTATATG | 600 |
GGTCAGCCAA TGTGGCAACA ACCAGGACCT GAGCAGCAGG ATCCTGACAA | 650 |
TTAG | 700 |
>AT1G54830.1 longest ORF length:217
MDQQGQSSAM NYGSNPYQTN AMTTTPTGSD HPAYHQIHQQ QQQQLTQQLQ | 50 |
SFWETQFKEI EKTTDFKNHS LPLARIKKIM KADEDVRMIS AEAPVVFARA | 100 |
CEMFILELTL RSWNHTEENK RRTLQKNDIA AAVTRTDIFD FLVDIVPRED | 150 |
LRDEVLGGVG AEAATAAGYP YGYLPPGTAP IGNPGMVMGN PGAYPPNPYM | 200 |
GQPMWQQPGP EQQDPDN | 250 |
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