fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G55460 DNA/RNA-binding protein Kin17, conserved region (.1)

>AT1G55460.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, HpaI, KpnI, NcoI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRI G|AATTC 211, 321
HindIII A|AGCTT 67
NdeI CA|TATG 1218


Click here to view TAIR data

>AT1G55460.1 length:1236
ATGGGTAAGA ACGATTTTCT AACCCCAAAG GCGATTGCGA ATCGAATTAA 
50
AGCCAAAGGA CTTCAAAAGC TTCGATGGTA TTGTCAGATG TGTCAGAAAC 
100
AATGCCGAGA CGAGAATGGA TTCAAGTGTC ATTGTATGAG CGAATCTCAC 
150
CAGAGGCAGA TGCAAGTTTT TGGGCAGAAT CCGACTCGTG TTGTCGATGG 
200
TTACTCTGAA GAATTCGAGC AGACGTTTCT CGATCTGATG AGGCGGAGCC 
250
ACCGTTTCTC TCGTATCGCT GCCACTGTTG TCTACAATGA GTATATTAAC 
300
GATAGACATC ATGTTCACAT GAATTCGACG GAGTGGGCGA CGTTGACGGA 
350
GTTTATCAAG CATCTTGGGA AAACTGGTAA GTGTAAGGTT GAAGAAACTC 
400
CTAAAGGTTG GTTTATTACT TATATAGATA GAGATTCTGA GACTTTGTTT 
450
AAGGAGAGGT TGAAGAATAA GAGAGTTAAG AGTGATTTAG CTGAGGAGGA 
500
GAAGCAAGAG AGGGAGATTC AGAGACAGAT TGAGAGAGCT GCTGAGAAAT 
550
TGAATGGTGG TGGTGGTGAA GGTGAAACCA GTGGTAATGA TGAAGTTGTG 
600
GATGATGGTG ATGATGAGAG GAAGAAAGAT GAAGACTTGA GGTTGAAGAG 
650
TGGGGTCAAG GTTGGATTTG CTCTTGGTGG AGGTGTTAAA CAGGTTGCTA 
700
CGGGTAAAGA GAGAGGGGAA AGCTCGAAAC TTTTGTTTGG GGATGAAGAG 
750
AATGACAAGG TTGAGAGAGG GGAGAAGAGG AAGAGAAGTG GGGACTCCGG 
800
GAGGAGCGAG AAGGAGAGGA GATCAGCTTT GGATGAGTTG ATGAAGGAGG 
850
AAGAGAAGAA GAAGGAGAGG ATGAATCGGA AAGATTACTG GTTGTTCGAA 
900
GGGATCATTG TGAAGGTGAT GAGTAAGGCT TTGGCAGAGA AAGGGTATTA 
950
TAAGCAAAAA GGTGTTGTGA AGAAAGTGAT TGATAATTAT GTTGGGGAGA 
1000
TCAAAATGCT TGATTCTAAA CATGTGTTGA GAGTTGATCA AAAGGAGCTA 
1050
GAGACTGTGC TTCCACAAAT TGGAGGGATG GTGAAGATAG TGAATGGGGC 
1100
ATATCGTGGT TCGAATGCAA GGTTGTTGGG TGTGGATACA GAGAAGTTCT 
1150
GTGCTAAAGT GCAGATCGAG AAAGGTGTCT ATGATGGAAG AGTCATCAAG 
1200
TCCATTGAGT ACGAGGACAT ATGCAAACTT GCTTAG
1250

>AT1G55460.1 longest ORF length:411
MGKNDFLTPK AIANRIKAKG LQKLRWYCQM CQKQCRDENG FKCHCMSESH 
50
QRQMQVFGQN PTRVVDGYSE EFEQTFLDLM RRSHRFSRIA ATVVYNEYIN 
100
DRHHVHMNST EWATLTEFIK HLGKTGKCKV EETPKGWFIT YIDRDSETLF 
150
KERLKNKRVK SDLAEEEKQE REIQRQIERA AEKLNGGGGE GETSGNDEVV 
200
DDGDDERKKD EDLRLKSGVK VGFALGGGVK QVATGKERGE SSKLLFGDEE 
250
NDKVERGEKR KRSGDSGRSE KERRSALDEL MKEEEKKKER MNRKDYWLFE 
300
GIIVKVMSKA LAEKGYYKQK GVVKKVIDNY VGEIKMLDSK HVLRVDQKEL 
350
ETVLPQIGGM VKIVNGAYRG SNARLLGVDT EKFCAKVQIE KGVYDGRVIK 
400
SIEYEDICKL A
450