fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G55950 DNA-binding storekeeper protein-related transcriptional regulator (.1)

>AT1G55950.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRV GAT|ATC 107


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>AT1G55950.1 length:612
ATGGCCAAGA AAAACAAGCG TTCCCAACAG AAGAACAAGT GTCTCAAACC 
50
GGAGAAAGAT CCATCGACGG TGAAGAGATT GTTGGAAGAT CCGCCGAGGA 
100
AGAAAAGATA TCTACAACCA TTGGAAAATC CACCGACGGA ATCTTATGGC 
150
GACGACGAGA AAATGGAGAC TGAGGAAGAA GGAGAAAAAT ATCTTGGTAA 
200
GAATCTTCCG GCTTCTGCTT TTATCATCGT TGCTGCTGAA AGGCATGACT 
250
CCGATTCATA TTCTGAAACC GAGCTGGAGA AGAAGATTTG CGGTTCCGTT 
300
GTTGTAGCCA AGATGAATGA TGATAAGATG GTGTCAACAG ATACCAAAAA 
350
GAAGTATTTT CAAAGAATAT TGAGTGATGA TGATAAGATC GTCTTGTTGC 
400
AAGGCATGGT TGATTTCCAG AATGATAAAG GGACGATTTC TTATGATGAT 
450
ATGACTGGTT TTATTGATAC GGTGAAGAAC ATCATTAGCT TTCAAGCGAA 
500
TAGTCGTCAA TTCACTACCA AAATCCGTCG TTTGAAAGAC AAGTTTGTAC 
550
AGAAAAGGAA CAAAGGTGTA GATGAGAACT CTCTAGCAAA TGTTGAAATA 
600
TATGAAATCT GA
650

>AT1G55950.1 longest ORF length:203
MAKKNKRSQQ KNKCLKPEKD PSTVKRLLED PPRKKRYLQP LENPPTESYG 
50
DDEKMETEEE GEKYLGKNLP ASAFIIVAAE RHDSDSYSET ELEKKICGSV 
100
VVAKMNDDKM VSTDTKKKYF QRILSDDDKI VLLQGMVDFQ NDKGTISYDD 
150
MTGFIDTVKN IISFQANSRQ FTTKIRRLKD KFVQKRNKGV DENSLANVEI 
200
YEI
250