fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G56010 NAC1, ANAC021, ANAC022 Arabidopsis NAC domain containing protein 22, Arabidopsis NAC domain containing protein 21, NAC domain containing protein 1 (.1.2)

>AT1G56010.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BglII, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, XbaI
Name Recognition sequence Cut positions
BamHI G|GATCC 393
EcoRI G|AATTC 223
SacI GAGCT|C 185, 267, 644
StyI C|C[AT][AT]GG 234
XhoI C|TCGAG 191


Click here to view TAIR data

>AT1G56010.1 length:774
ATGGCATGCG TGGGAGGGAA GGATTGGTAT TTCTACAGCC AAAGAGACCG 
50
AAAATACGCG ACGGGGCTGA GAACTAACCG AGCAACGGCC ACCGGATATT 
100
GGAAAGCCAC CGGCAAAGAC AGAACCATTC TAAGAAAGGG TAAGCTAGTT 
150
GGGATGAGGA AGACATTGGT TTTCTATCAA GGTCGAGCTC CTCGAGGCCG 
200
TAAAACCGAT TGGGTCATGC ACGAATTCCG TCTCCAAGGA TCTCATCATC 
250
CTCCCAATCA TTCTCTGAGC TCTCCAAAGG AAGACTGGGT CTTGTGTAGG 
300
GTATTCCATA AGAATACGGA AGGAGTTATA TGTAGAGACA ACATGGGAAG 
350
CTGTTTTGAT GAGACAGCCT CTGCATCGCT TCCTCCACTG ATGGATCCTT 
400
ACATCAACTT TGACCAAGAA CCCTCTTCTT ATCTCAGTGA TGATCATCAC 
450
TACATCATCA ATGAGCACGT ACCCTGCTTC TCCAATTTGT CACAGAACCA 
500
AACCTTAAAC TCGAACCTAA CCAACTCAGT CTCTGAACTC AAGATTCCAT 
550
GCAAGAACCC TAACCCCTTG TTTACTGGTG GTTCAGCCTC AGCCACGCTC 
600
ACAGGCCTCG ACTCATTCTG TTCTTCAGAT CAGATGGTTC TCAGAGCTCT 
650
ACTCAGTCAG CTCACTAAGA TTGATGGAAG CCTCGGGCCT AAAGAATCAC 
700
AGAGTTATGG AGAAGGTAGC TCGGAGAGCC TCCTGACCGA CATCGGTATT 
750
CCAAGCACTG TTTGGAATTG CTGA
800

>AT1G56010.1 longest ORF length:257
MACVGGKDWY FYSQRDRKYA TGLRTNRATA TGYWKATGKD RTILRKGKLV 
50
GMRKTLVFYQ GRAPRGRKTD WVMHEFRLQG SHHPPNHSLS SPKEDWVLCR 
100
VFHKNTEGVI CRDNMGSCFD ETASASLPPL MDPYINFDQE PSSYLSDDHH 
150
YIINEHVPCF SNLSQNQTLN SNLTNSVSEL KIPCKNPNPL FTGGSASATL 
200
TGLDSFCSSD QMVLRALLSQ LTKIDGSLGP KESQSYGEGS SESLLTDIGI 
250
PSTVWNC
300