fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G56010 NAC1, ANAC021, ANAC022 Arabidopsis NAC domain containing protein 22, Arabidopsis NAC domain containing protein 21, NAC domain containing protein 1 (.1.2)

>AT1G56010.2 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BglII, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, XbaI
Name Recognition sequence Cut positions
BamHI G|GATCC 594
EcoRI G|AATTC 424
SacI GAGCT|C 386, 468, 845
StyI C|C[AT][AT]GG 184, 435
XhoI C|TCGAG 392


Click here to view TAIR data

>AT1G56010.2 length:975
ATGGAGACGG AAGAAGAGAT GAAGGAAAGT AGTATAAGCA TGGTGGAGGC 
50
AAAGTTGCCT CCGGGATTCA GATTTCACCC GAAGGACGAT GAGCTTGTCT 
100
GCGATTACTT GATGAGACGA TCGCTTCACA ATAATCATCG ACCACCTCTT 
150
GTCCTGATCC AAGTCGATCT CAACAAGTGT GAGCCTTGGG ACATCCCAAA 
200
AATGGCATGC GTGGGAGGGA AGGATTGGTA TTTCTACAGC CAAAGAGACC 
250
GAAAATACGC GACGGGGCTG AGAACTAACC GAGCAACGGC CACCGGATAT 
300
TGGAAAGCCA CCGGCAAAGA CAGAACCATT CTAAGAAAGG GTAAGCTAGT 
350
TGGGATGAGG AAGACATTGG TTTTCTATCA AGGTCGAGCT CCTCGAGGCC 
400
GTAAAACCGA TTGGGTCATG CACGAATTCC GTCTCCAAGG ATCTCATCAT 
450
CCTCCCAATC ATTCTCTGAG CTCTCCAAAG GAAGACTGGG TCTTGTGTAG 
500
GGTATTCCAT AAGAATACGG AAGGAGTTAT ATGTAGAGAC AACATGGGAA 
550
GCTGTTTTGA TGAGACAGCC TCTGCATCGC TTCCTCCACT GATGGATCCT 
600
TACATCAACT TTGACCAAGA ACCCTCTTCT TATCTCAGTG ATGATCATCA 
650
CTACATCATC AATGAGCACG TACCCTGCTT CTCCAATTTG TCACAGAACC 
700
AAACCTTAAA CTCGAACCTA ACCAACTCAG TCTCTGAACT CAAGATTCCA 
750
TGCAAGAACC CTAACCCCTT GTTTACTGGT GGTTCAGCCT CAGCCACGCT 
800
CACAGGCCTC GACTCATTCT GTTCTTCAGA TCAGATGGTT CTCAGAGCTC 
850
TACTCAGTCA GCTCACTAAG ATTGATGGAA GCCTCGGGCC TAAAGAATCA 
900
CAGAGTTATG GAGAAGGTAG CTCGGAGAGC CTCCTGACCG ACATCGGTAT 
950
TCCAAGCACT GTTTGGAATT GCTGA
1000

>AT1G56010.2 longest ORF length:324
METEEEMKES SISMVEAKLP PGFRFHPKDD ELVCDYLMRR SLHNNHRPPL 
50
VLIQVDLNKC EPWDIPKMAC VGGKDWYFYS QRDRKYATGL RTNRATATGY 
100
WKATGKDRTI LRKGKLVGMR KTLVFYQGRA PRGRKTDWVM HEFRLQGSHH 
150
PPNHSLSSPK EDWVLCRVFH KNTEGVICRD NMGSCFDETA SASLPPLMDP 
200
YINFDQEPSS YLSDDHHYII NEHVPCFSNL SQNQTLNSNL TNSVSELKIP 
250
CKNPNPLFTG GSASATLTGL DSFCSSDQMV LRALLSQLTK IDGSLGPKES 
300
QSYGEGSSES LLTDIGIPST VWNC
350