Locus |
Common name |
Short description |
AT1G56160 |
ATMYB72 |
ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 72, myb domain protein 72 (.1) |
>AT1G56160.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, EcoRI, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, SacI, SalI, SmaI, SpeI, XbaI
Name |
Recognition sequence |
Cut positions |
BglII
| A|GATCT |
69, 118 |
EcoRV
| GAT|ATC |
619, 730 |
HindIII
| A|AGCTT |
130 |
NcoI
| C|CATGG |
52 |
PvuII
| CAG|CTG |
781 |
StyI
| C|C[AT][AT]GG |
52, 258, 498 |
XhoI
| C|TCGAG |
686 |
Click here to view TAIR data
>AT1G56160.1 length:891
ATGGGGAAAG GAAGAGCACC ATGCTGCGAC AAGAACAAAG TGAAGAGAGG | 50 |
GCCATGGAGC CCTCAAGAAG ATCTCACTCT CATCACTTTT ATTCAAAAAC | 100 |
ATGGCCATCA AAACTGGAGA TCTCTTCCCA AGCTTGCTGG ATTGTTGAGA | 150 |
TGTGGGAAAA GTTGCCGACT AAGATGGATA AACTATCTGA GACCGGACGT | 200 |
GAAGCGAGGC AACTTTAGCA AAAAGGAGGA AGATGCTATC ATTCACTACC | 250 |
ATCAAACCCT TGGAAACAAG TGGTCAAAGA TCGCGTCCTT CTTGCCGGGA | 300 |
AGAACTGACA ACGAGATCAA AAACGTGTGG AACACGCATC TCAAGAAACG | 350 |
ACTCACTCCA TCTTCTTCTT CTTCATCCCT CTCTAGCACT CATGACCAAA | 400 |
GCACAAAAGC AGATCATGAC AAGAACTGTG ACGGGGCTCA AGAAGAAATA | 450 |
CATTCAGGGT TAAATGAGAG CCAAAACTCA GCTACTTCGT CACATCACCA | 500 |
AGGCGAGTGT ATGCACACAA AACCAGAGCT TCATGAGGTT AATGGACTCA | 550 |
ACGAGATCCA GTTCCTGCTC GACCATGATG ACTTTGATGA TATAACCTCT | 600 |
GAGTTTCTTC AGGATAACGA TATCTTATTT CCGCTAGACT CTCTTCTTCA | 650 |
TAACCACCAA ACTCACATTT CAACCCAAGA AATGACTCGA GAGGTAACCA | 700 |
AATCGCAATC ATTTGATCAT CCTCAACCGG ATATCCCATG CGGATTTGAA | 750 |
GACACAAACG AAGAATCCGA CTTGAGGAGA CAGCTGGTTG AATCAACCAC | 800 |
ACCTAACAAT GAGTACGACG AGTGGTTCAA CTTCATTGAC AACCAAACTT | 850 |
ACTTTGATGA TTTTAATTTC GTCGGAGAAG TATGTCTATG A | 900 |
>AT1G56160.1 longest ORF length:296
MGKGRAPCCD KNKVKRGPWS PQEDLTLITF IQKHGHQNWR SLPKLAGLLR | 50 |
CGKSCRLRWI NYLRPDVKRG NFSKKEEDAI IHYHQTLGNK WSKIASFLPG | 100 |
RTDNEIKNVW NTHLKKRLTP SSSSSSLSST HDQSTKADHD KNCDGAQEEI | 150 |
HSGLNESQNS ATSSHHQGEC MHTKPELHEV NGLNEIQFLL DHDDFDDITS | 200 |
EFLQDNDILF PLDSLLHNHQ THISTQEMTR EVTKSQSFDH PQPDIPCGFE | 250 |
DTNEESDLRR QLVESTTPNN EYDEWFNFID NQTYFDDFNF VGEVCL | 300 |
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