fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G56160 ATMYB72 ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 72, myb domain protein 72 (.1)

>AT1G56160.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, EcoRI, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, SacI, SalI, SmaI, SpeI, XbaI
Name Recognition sequence Cut positions
BglII A|GATCT 69, 118
EcoRV GAT|ATC 619, 730
HindIII A|AGCTT 130
NcoI C|CATGG 52
PvuII CAG|CTG 781
StyI C|C[AT][AT]GG 52, 258, 498
XhoI C|TCGAG 686


Click here to view TAIR data

>AT1G56160.1 length:891
ATGGGGAAAG GAAGAGCACC ATGCTGCGAC AAGAACAAAG TGAAGAGAGG 
50
GCCATGGAGC CCTCAAGAAG ATCTCACTCT CATCACTTTT ATTCAAAAAC 
100
ATGGCCATCA AAACTGGAGA TCTCTTCCCA AGCTTGCTGG ATTGTTGAGA 
150
TGTGGGAAAA GTTGCCGACT AAGATGGATA AACTATCTGA GACCGGACGT 
200
GAAGCGAGGC AACTTTAGCA AAAAGGAGGA AGATGCTATC ATTCACTACC 
250
ATCAAACCCT TGGAAACAAG TGGTCAAAGA TCGCGTCCTT CTTGCCGGGA 
300
AGAACTGACA ACGAGATCAA AAACGTGTGG AACACGCATC TCAAGAAACG 
350
ACTCACTCCA TCTTCTTCTT CTTCATCCCT CTCTAGCACT CATGACCAAA 
400
GCACAAAAGC AGATCATGAC AAGAACTGTG ACGGGGCTCA AGAAGAAATA 
450
CATTCAGGGT TAAATGAGAG CCAAAACTCA GCTACTTCGT CACATCACCA 
500
AGGCGAGTGT ATGCACACAA AACCAGAGCT TCATGAGGTT AATGGACTCA 
550
ACGAGATCCA GTTCCTGCTC GACCATGATG ACTTTGATGA TATAACCTCT 
600
GAGTTTCTTC AGGATAACGA TATCTTATTT CCGCTAGACT CTCTTCTTCA 
650
TAACCACCAA ACTCACATTT CAACCCAAGA AATGACTCGA GAGGTAACCA 
700
AATCGCAATC ATTTGATCAT CCTCAACCGG ATATCCCATG CGGATTTGAA 
750
GACACAAACG AAGAATCCGA CTTGAGGAGA CAGCTGGTTG AATCAACCAC 
800
ACCTAACAAT GAGTACGACG AGTGGTTCAA CTTCATTGAC AACCAAACTT 
850
ACTTTGATGA TTTTAATTTC GTCGGAGAAG TATGTCTATG A
900

>AT1G56160.1 longest ORF length:296
MGKGRAPCCD KNKVKRGPWS PQEDLTLITF IQKHGHQNWR SLPKLAGLLR 
50
CGKSCRLRWI NYLRPDVKRG NFSKKEEDAI IHYHQTLGNK WSKIASFLPG 
100
RTDNEIKNVW NTHLKKRLTP SSSSSSLSST HDQSTKADHD KNCDGAQEEI 
150
HSGLNESQNS ATSSHHQGEC MHTKPELHEV NGLNEIQFLL DHDDFDDITS 
200
EFLQDNDILF PLDSLLHNHQ THISTQEMTR EVTKSQSFDH PQPDIPCGFE 
250
DTNEESDLRR QLVESTTPNN EYDEWFNFID NQTYFDDFNF VGEVCL
300