Locus |
Common name |
Short description |
AT1G56170 |
NF-YC2, ATHAP5B, HAP5B |
"nuclear factor Y, subunit C2", nuclear factor Y, subunit C2 (.1.2) |
>AT1G56170.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
BamHI
| G|GATCC |
356 |
NdeI
| CA|TATG |
100 |
SacI
| GAGCT|C |
337 |
StyI
| C|C[AT][AT]GG |
311 |
Click here to view TAIR data
>AT1G56170.1 length:600
ATGGAGCAGT CAGAAGAGGG TCAACAGCAA CAGCAACAGG GAGTGATGGA | 50 |
TTATGTACCT CCTCATGCTT ATCAGAGTGG GCCAGTAAAT GCAGCTTCCC | 100 |
ATATGGCATT CCAACAAGCT CACCACTTCC ACCACCACCA TCAGCAGCAA | 150 |
CAACAGCAGC AGCTTCAGAT GTTCTGGGCT AACCAAATGC AAGAGATCGA | 200 |
GCATACCACT GATTTCAAGA ACCACACCCT TCCCCTAGCC CGCATCAAGA | 250 |
AGATCATGAA AGCTGATGAA GATGTGAGGA TGATCTCTGC GGAGGCTCCT | 300 |
GTGATTTTTG CCAAGGCCTG TGAGATGTTC ATTTTGGAGC TCACTCTACG | 350 |
TGCTTGGATC CACACCGAGG AGAACAAGAG GAGGACCTTG CAGAAGAACG | 400 |
ACATCGCCGC TGCCATTTCC AGGACCGACG TGTTTGATTT CCTTGTGGAC | 450 |
ATAATCCCGA GGGACGAGCT GAAAGAAGAA GGTTTAGGCG TGACCAAAGG | 500 |
GACCATACCA TCGGTGGTGG GTTCCCCGCC ATACTATTAC TTGCAACAAC | 550 |
AGGGGATGAT GCAACACTGG CCCCAGGAGC AACACCCTGA TGAGTCTTAA | 600 |
>AT1G56170.1 longest ORF length:199
MEQSEEGQQQ QQQGVMDYVP PHAYQSGPVN AASHMAFQQA HHFHHHHQQQ | 50 |
QQQQLQMFWA NQMQEIEHTT DFKNHTLPLA RIKKIMKADE DVRMISAEAP | 100 |
VIFAKACEMF ILELTLRAWI HTEENKRRTL QKNDIAAAIS RTDVFDFLVD | 150 |
IIPRDELKEE GLGVTKGTIP SVVGSPPYYY LQQQGMMQHW PQEQHPDES | 200 |
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