fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G57560 ATMYB50 myb domain protein 50 (.1)

>AT1G57560.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SpeI, XbaI
Name Recognition sequence Cut positions
EcoRI G|AATTC 324
HindIII A|AGCTT 878
NcoI C|CATGG 99
SmaI CCC|GGG 289
StyI C|C[AT][AT]GG 99, 862, 896
XhoI C|TCGAG 136


Click here to view TAIR data

>AT1G57560.1 length:945
ATGAAGAGAC ATTCTTGTTG TTACAAACAA AAGCTGAGAA AAGGTCTTTG 
50
GTCTCCTGAA GAAGATGAGA AACTTCTCAA TTACATTACC AAACATGGCC 
100
ATGGTTGCTG GAGTTCTGTC CCTAAACTCG CAGGTCTCGA GAGATGTGGA 
150
AAGAGCTGTA GACTCAGATG GATCAATTAC TTAAGACCTG ATTTAAAGAG 
200
AGGAGCTTTC TCTTCAGAGG AACAGAATCT CATTGTCGAG CTTCATGCTG 
250
TTCTTGGAAA CAGATGGTCG CAAATTGCTG CGAGGCTTCC CGGGAGAACC 
300
GACAACGAGA TAAAGAACTT GTGGAATTCG TGCATTAAGA AGAAGCTGAT 
350
GAAGAAAGGC ATTGACCCTA TTACACATAA ACCCCTCTCC GAGGTTGGTA 
400
AAGAAACAAA CAGAAGCGAC AATAACAATT CCACAAGTTT TTCCTCAGAA 
450
ACTAATCAAG ACTTGTTTGT CAAGAAAACG TCTGATTTTG CCGAGTATTC 
500
TGCGTTTCAG AAAGAAGAAT CCAACTCTGT TTCACTCAGA AATTCGCTCT 
550
CTTCCATGAT CCCAACGCAA TTCAACATCG ACGATGGTTC TGTCTCAAAT 
600
GCGGGTTTTG ATACACAAGT ATGCGTGAAA CCCTCGATTA TTCTTCTTCC 
650
TCCTCCAAAC AACACTTCAA GCACTGTCTC TGGACAGGAT CATGTAAACG 
700
TGTCAGAGCC TAATTGGGAA TCAAACAGTG GAACCACAAG CCACCTCAAC 
750
AATCCCGGTA TGGAAGAAAT GAAATGGTCC GAGGAGTACC TAAACGAATC 
800
GTTATTCTCT ACCCAAGTTT ACGTGAAATC AGAGACGGAT TTCAACTCCA 
850
ACATTGCCTT TCCTTGGAGC CAAAGCCAAG CTTGTGACGT ATTCCCCAAG 
900
GATCTTCAGA GAATGGCCTT CTCTTTTGGT GGTCAGACCC TTTAG
950

>AT1G57560.1 longest ORF length:314
MKRHSCCYKQ KLRKGLWSPE EDEKLLNYIT KHGHGCWSSV PKLAGLERCG 
50
KSCRLRWINY LRPDLKRGAF SSEEQNLIVE LHAVLGNRWS QIAARLPGRT 
100
DNEIKNLWNS CIKKKLMKKG IDPITHKPLS EVGKETNRSD NNNSTSFSSE 
150
TNQDLFVKKT SDFAEYSAFQ KEESNSVSLR NSLSSMIPTQ FNIDDGSVSN 
200
AGFDTQVCVK PSIILLPPPN NTSSTVSGQD HVNVSEPNWE SNSGTTSHLN 
250
NPGMEEMKWS EEYLNESLFS TQVYVKSETD FNSNIAFPWS QSQACDVFPK 
300
DLQRMAFSFG GQTL
350