fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G58110 Basic-leucine zipper (bZIP) transcription factor family protein (.1), Basic-leucine zipper (bZIP) transcription factor family protein (.2)

>AT1G58110.2 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NotI, PacI, PstI, SacI, SalI, SpeI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 1029
HindIII A|AGCTT 151, 907
NheI G|CTAGC 4
PvuII CAG|CTG 815
SmaI CCC|GGG 45
StyI C|C[AT][AT]GG 11
XbaI T|CTAGA 309


Click here to view TAIR data

>AT1G58110.2 length:1125
ATGGCTAGCT CCAAGGGATC ACAGAGTGTT AGAAACTTGA TGTACCCGGG 
50
AAAGCATGCT TTGCTCCCAC CAAAAATACC GTTTCCTAGT GTATCAGCAT 
100
CGTATTCCGA GTATATTCCT ACTGGTTTGA TTGGTTCAAG ACATGGTCAG 
150
AAGCTTAGTA ATGAGAAAAC ACATCACCAG CGAACTTCCT CCGAGAGCCA 
200
TTTGGTAGAA GAGCTTCCCT TTTGGCTTGA TGATCTTCTC AATGAGCAGC 
250
CGGAAAGCCC TGCTCGAAAA TGTGGTCATC GGCGTTCATC AAGTGACTCT 
300
TACGCTTATC TAGATGTGGC TAATGCTACA AACATAAGTT TGACTCTCCA 
350
AAATGATTTC AGTTATAGGA ATACTGTTTT ATCCACTCAA AGAGGAGTCC 
400
AAGAGCTTGA CCGGAATAAA AATGCTCAGG ATGCTGCCTT CTACTCTGGT 
450
GCTAGTTTTC TGAAACAGAA GAGTCGTCAG CGGGATTCTT TGGTGGCAAC 
500
TGGGGCTTGT CCTTCTTGGT TACCTTTCGC TCGTGAGAAC GGTGGCGGAA 
550
AAAACTTGGG AGCTTTATAT ATGTCTCAAG ATGCAACAGT AATATCGTCA 
600
GAAAGAAAGA ACTATGCTGA ACCTTTTTCT CATGACCCAA AGATGTTATC 
650
TTCTGAGGAA AACAACTCCA ATCCTTCGCC TGTGACTTAT GAAGCTGACA 
700
ACACAAAACG AGCCAAACAG CAATTTGCAC AAAGATCACG GGTCCGTAAG 
750
CTCCAGTACA TATCTGAGCT AGAAAGAAAT GTACAGACAT TGCAGGCAGA 
800
AGGCTCCAAA GTTTCAGCTG AACTTGATTT TCTCAACCAG AGGAATCTTA 
850
TTCTGAGTAT GGAAAATAAA GCTCTCAAGA AGCGTCTCGA AAGTATAGCT 
900
CAGGAGAAGC TTATCAAACA ATTGGAACAA GAAGTGTTGG AAAAGGAGAT 
950
TGGGAGACTA CGAGCGTTGT ATCAGCAACA ACAACAAACT CAAAAACCAT 
1000
CAGCCAGTCG CGGACGTGCT ACTAGCAAAG ATCTCGACTC TCAGTTCTCC 
1050
AGTCTTTCAC TGAACACCAA AGATTCCAAC TGTAGGCGTG ACTCTGTATC 
1100
TGTGATGGGT CAATTCCACT TTTAG
1150

>AT1G58110.2 longest ORF length:374
MASSKGSQSV RNLMYPGKHA LLPPKIPFPS VSASYSEYIP TGLIGSRHGQ 
50
KLSNEKTHHQ RTSSESHLVE ELPFWLDDLL NEQPESPARK CGHRRSSSDS 
100
YAYLDVANAT NISLTLQNDF SYRNTVLSTQ RGVQELDRNK NAQDAAFYSG 
150
ASFLKQKSRQ RDSLVATGAC PSWLPFAREN GGGKNLGALY MSQDATVISS 
200
ERKNYAEPFS HDPKMLSSEE NNSNPSPVTY EADNTKRAKQ QFAQRSRVRK 
250
LQYISELERN VQTLQAEGSK VSAELDFLNQ RNLILSMENK ALKKRLESIA 
300
QEKLIKQLEQ EVLEKEIGRL RALYQQQQQT QKPSASRGRA TSKDLDSQFS 
350
SLSLNTKDSN CRRDSVSVMG QFHF
400