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| Locus | Common name | Short description |
| AT1G58220 | Homeodomain-like superfamily protein (.1) |
>AT1G58220.1 CDS map
>>Show genomic map
Uncut enzymes: AscI, BamHI, BglII, EcoRI, HindIII, HpaI, NcoI, NheI, NotI, PacI, SalI, SmaI, XbaI
| Name | Recognition sequence | Cut positions |
| ApaI | GGGCC|C | 653 |
| EcoRV | GAT|ATC | 1365, 1509 |
| KpnI | GGTAC|C | 880 |
| NdeI | CA|TATG | 1861 |
| PstI | CTGCA|G | 1082, 1478, 1613, 1685 |
| PvuII | CAG|CTG | 527, 596, 648 |
| SacI | GAGCT|C | 1949 |
| SpeI | A|CTAGT | 178 |
| StyI | C|C[AT][AT]GG | 2234 |
| XhoI | C|TCGAG | 254, 1004 |
Click here to view TAIR data
>AT1G58220.1 length:2505
ATGGTTGATA ACAGTAACAA TAAGAAGAGG AAAGAGTTCA TCAGTGAAGC | 50 |
AGACATCGCC ACTCTTTTGC AGAGATATGA TACTGTGACG ATACTGAAGT | 100 |
TGCTACAAGA AATGGCGTAT TATGCTGAAG CAAAGATGAA TTGGAATGAG | 150 |
TTAGTGAAGA AGACAAGTAC TGGAATTACT AGTGCTAGAG AATATCAGTT | 200 |
GCTTTGGCGG CATCTTGCTT ATAGAGATTC TCTCGTCCCT GTGGGAAATA | 250 |
ATGCTCGAGT TCTGGATGAT GATAGTGATA TGGAGTGTGA ATTGGAAGCA | 300 |
TCCCCTGGAG TTAGTGTTGA TGTAGTAACG GAAGCTGTTG CGCATGTGAA | 350 |
AGTGATGGCT GCTTCCTATG TGCCAAGTGA GTCCGATATT CCCGAAGACT | 400 |
CAACGGTTGA GGCTCCCTTG ACCATTAACA TACCTTACAG CCTGCATAGG | 450 |
GGGCCTCAGG AACCATCAGA CTCATATTGG TCATCAAGAG GGATGAATAT | 500 |
CACCTTTCCT GTTTTTCTTC CGAAAGCAGC TGAAGGACAT AATGGGAATG | 550 |
GGTTAGCCAG TAGCTTGGCT CCTCGGAAGA GAAGAAAAAA ATGGTCAGCT | 600 |
GAGGAGGATG AGGAGCTGAT TGCTGCTGTT AAGCGACATG GTGAAGGCAG | 650 |
CTGGGCCCTT ATCTCTAAGG AAGAATTTGA AGGAGAGCGA ACAGCCTCAC | 700 |
AACTCTCACA GCGGTGGGGG GCTATAAGGA GAAGGACTGA TACTTCAAAC | 750 |
ACTTCTACCC AAACTGGCCT ACAGCGAACA GAAGCACAAA TGGCAGCTAA | 800 |
TCGTGCATTA TCTTTAGCGG TGGGAAATCG GTTACCCTCA AAAAAACTTG | 850 |
CAGTAGGTAT GACTCCAATG CTGTCATCCG GTACCATCAA GGGAGCACAA | 900 |
GCCAATGGTG CCAGCAGTGG TAGTACATTG CAAGGTCAAC AACAGCCTCA | 950 |
GCCACAAATT CAAGCATTAT CACGGGCAAC AACATCAGTG CCAGTTGCAA | 1000 |
AATCTCGAGT TCCTGTAAAG AAAACAACAG GGAACTCCAC TTCGAGAGCA | 1050 |
GACCTAATGG TAACTGCTAA TTCAGTAGCT GCTGCAGCCT GTATGTCTGG | 1100 |
CCTGGCAACC GCTGTAACAG TGCCTAAGAT TGAACCAGGA AAGAATGCTG | 1150 |
TTTCTGCGTT GGTGCCGAAG ACTGAACCCG TAAAAACCGC TTCCACAGTT | 1200 |
TCTATGCCTC GTCCTTCAGG TATATCATCA GCACTGAATA CTGAGCCTGT | 1250 |
AAAAACCGCT GTGGCAGCCT CTTTGCCTCG TTCATCAGGT ATTATTTCAG | 1300 |
CACCAAAGGT TGAGCCTGTA AAAACCGCTG CTTCAGCAGC CTCTTTGCCT | 1350 |
CGTCCATCAG GAATGATATC AGCACCAAAG GTTGAGCCTG TGAAAACCAC | 1400 |
CGCCTCTGTA GCCTCTTTGC CTCGTCCATC AGGTATTATT TCAGCTCCAA | 1450 |
AGGCTGAGCC TGTAAAAACC GCTGCTTCTG CAGCCTCTTC GCCTCGTCCA | 1500 |
TCAGGAATGA TATCAGCACC AAAGGTTGAG TCTGTGAAAA CCACCGCCTC | 1550 |
TATGCCTCGT CCATCAGGTA TTATATCCGC ACCAAAGGCT GAGCTTGTAA | 1600 |
AATCCGCCGC TTCTGCAGCC TCTTTGCCTT GTACATCAGG TATTATATCT | 1650 |
TCACCAAAGG CTGAGCTTGT AAAATCCGCC GCTTCTGCAG CCTCTTTTCC | 1700 |
TCGCCCATCA AGTATGCTAT CAGCACCAAA GGCTGACCCA GTAAAGATTG | 1750 |
TTCCTGCTGC TGCCACTAAC ACTAAATCGG TTGGACCTTT GAATTTAAGG | 1800 |
CATGCAGTCA ATGGAAGCCC AAACCACACG ATACCTTCAT CACCCTTTAC | 1850 |
TAAGCCTTTA CATATGGCTC CTCTCTCCAA AGGATCTACA ATCCAGAGTA | 1900 |
ATTCAGTTCC TCCTAGTTTT GCATCGTCAA GGTTGGTCCC CACACAGAGA | 1950 |
GCTCCTGCGG CTACTGTTGT CACGCCACAA AAGCCAAGTG TGGTAGCGGC | 2000 |
AGCTACTGTT GTCACGCCAC AAAAGCCAAG TGTGGGAGCA GCAGCTACTG | 2050 |
TTGTAACGCC ACAAAAGCCA AGTGTGGGAG CAGCAGCTAA TGTTGTAACG | 2100 |
CCACAAAAGC CAAGTGTGGG ATCAGCAGCT ACTGTTGTAA CGCCACAAAA | 2150 |
GCCAAGTGTG GGAGCAGCAG TTACCGTCAC TTCCAAGCCG GTTGGTGTAC | 2200 |
AGAAAGAGCA AACTCAGGGA AACAGAGCAA GCCCCTTGGT TACAGCAACA | 2250 |
CTTCCGCCAA ATAAAACCAT CCCAGCAAAT TCAGTGATTG GCACAGCAAA | 2300 |
AGCGGTGGCT GCGAAAGTGG AGACTCCTCC TAGCCTTATG CCTAAGAAAA | 2350 |
ATGAAGTAGT TGGCAGTTGC ACCGATAAAA GTTCATTGGA TAAACCACCT | 2400 |
GAGAAAGAAA GTACTACCAC GGTGTCACCT CTAGCTGTAG CTGCGACTAA | 2450 |
ATCAAAACCC AAAGATGAAG CAACCGTGAC AGGGACCGGA CTGAAGGAGT | 2500 |
TGTAG | 2550 |
>AT1G58220.1 longest ORF length:834
MVDNSNNKKR KEFISEADIA TLLQRYDTVT ILKLLQEMAY YAEAKMNWNE | 50 |
LVKKTSTGIT SAREYQLLWR HLAYRDSLVP VGNNARVLDD DSDMECELEA | 100 |
SPGVSVDVVT EAVAHVKVMA ASYVPSESDI PEDSTVEAPL TINIPYSLHR | 150 |
GPQEPSDSYW SSRGMNITFP VFLPKAAEGH NGNGLASSLA PRKRRKKWSA | 200 |
EEDEELIAAV KRHGEGSWAL ISKEEFEGER TASQLSQRWG AIRRRTDTSN | 250 |
TSTQTGLQRT EAQMAANRAL SLAVGNRLPS KKLAVGMTPM LSSGTIKGAQ | 300 |
ANGASSGSTL QGQQQPQPQI QALSRATTSV PVAKSRVPVK KTTGNSTSRA | 350 |
DLMVTANSVA AAACMSGLAT AVTVPKIEPG KNAVSALVPK TEPVKTASTV | 400 |
SMPRPSGISS ALNTEPVKTA VAASLPRSSG IISAPKVEPV KTAASAASLP | 450 |
RPSGMISAPK VEPVKTTASV ASLPRPSGII SAPKAEPVKT AASAASSPRP | 500 |
SGMISAPKVE SVKTTASMPR PSGIISAPKA ELVKSAASAA SLPCTSGIIS | 550 |
SPKAELVKSA ASAASFPRPS SMLSAPKADP VKIVPAAATN TKSVGPLNLR | 600 |
HAVNGSPNHT IPSSPFTKPL HMAPLSKGST IQSNSVPPSF ASSRLVPTQR | 650 |
APAATVVTPQ KPSVVAAATV VTPQKPSVGA AATVVTPQKP SVGAAANVVT | 700 |
PQKPSVGSAA TVVTPQKPSV GAAVTVTSKP VGVQKEQTQG NRASPLVTAT | 750 |
LPPNKTIPAN SVIGTAKAVA AKVETPPSLM PKKNEVVGSC TDKSSLDKPP | 800 |
EKESTTTVSP LAVAATKSKP KDEATVTGTG LKEL | 850 |