|
|
|
|
|
|
|
|
| Locus | Common name | Short description |
| AT1G59640 | ZCW32, bHLH031, BPE, BPEUB, BPEP | BIG PETAL UB, BIG PETAL P (.1.2) |
>AT1G59640.1 CDS map
>>Show genomic map
Uncut enzymes: AatII, Acc65I, AclI, AfeI, AflII, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, ApoI, AscI, AseI, AvaI, AvrII, BaeI, BalI, BanI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BglI, BlpI, BmrI, BpmI, BsaAI, BsaHI, BsaI, BsaXI, BseRI, BsgI, BsiEI, BsiHKAI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, Bsp1286I, BspHI, BspMI, BspT107I(HgiCI), BsrDI, BsrFI, BsrGI, BsrI, BssHII, BssSI, BstAPI, BstEII, BstXI, BstZ17I, Bsu36I, BtgI, BtrI, BtsI, Cfr10I, DraI, DraIII, DrdI, EaeI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeIII, HgaI, HpaI, HphI, Hpy99I, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MlyI, MnlI, MscI, NaeI, , NarI, NcoI, NdeI, NgoMIV, NheI, NotI, NruI, NsiI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspOMI, PstI, PvuI, RsaI, RsrII, SacI, SacII, SalI, SapI, SbfI, ScaI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, SspI, StuI, StyI, SwaI, TliI, TspRI, Tth111I, XcmI, XhoI, XmaI
| Name | Recognition sequence | Cut positions |
| AccI | GT|[AC][TG]AC | 711 |
| AccII(FnuDII) | CG|CG | 168, 181 |
| AccIII(BspMII) | T|CCGGA | 687 |
| AciI | C|CGC | 81 |
| AflIII | A|CPuPyGT | 182 |
| AluI | AG|CT | 104, 148, 409, 424, 445, 603 |
| AvaII | G|G[AT]CC | 30, 114 |
| BamHI | G|GATCC | 3 |
| BfaI | C|TAG | 41, 96, 276, 344, 411, 542 |
| BglII | A|GATCT | 50, 498 |
| BsaBI | GATNN|NNATC | 137, 487 |
| BsaJI | C|CNNGG | 633 |
| BsaWI | [AT]|CCGG[AT] | 687 |
| BslI | CCNNNNN|NNGG | 69, 220 |
| BspDI | AT|CGAT | 597 |
| BspEI | T|CCGGA | 687 |
| BsrBI | GAG|CGG | 478 |
| BssKI | |CCNGG | 507, 633 |
| BstBI | TT|CGAA | 778 |
| BstF5I | GGATGNN| | 15, 483, 512 |
| BstNI | CC|[AT]GG | 633 |
| BstUI | CG|CG | 168, 181 |
| BstYI | Pu|GATCPy | 3, 50, 498 |
| Cac8I | GCN|NGC | 672 |
| ClaI | AT|CGAT | 597 |
| DdeI | C|TNAG | 190, 244 |
| DpnI | GA-CH3|TC | 2, 49, 137, 161, 256, 497, 765 |
| DpnII | |GATC | 2, 49, 137, 161, 256, 497, 765 |
| Fnu4HI | GC|NGC | 150 |
| HaeII | PuGCGC|Py | 217, 274 |
| HhaI | GCG|C | 167, 216, 273 |
| HinP1I | G|CGC | 167, 216, 273 |
| HincII | GTPy|PuAC | 616 |
| HindIII | A|AGCTT | 105, 604 |
| HinfI | G|ANTC | 90, 119, 176, 240, 339, 683 |
| HpaII | C|CGG | 84, 213, 506, 686 |
| Hpy188I | TCN|GA | 5 |
| HpyCH4III | ACN|GT | 32, 157, 439, 695, 724 |
| HpyCH4IV | A|CGT | 577, 785 |
| HpyCH4V | TG|CA | 492, 573, 750, 756 |
| MboI | |GATC | 2, 49, 137, 161, 256, 497, 765 |
| MluI | A|CGCGT | 182 |
| MseI | T|TAA | 36, 555 |
| MslI | CAPyNN|NNPuTG | 744 |
| MspA1I | C[AC]G|C[GT]G | 149 |
| MspI | C|CGG | 84, 213, 506, 686 |
| MwoI | GCNNNNN|NNGC | 453 |
| N.BstNBI | GAGTCNNNN|N | 181, 245 |
| NciI | CC|[CG]GG | 507 |
| NlaIII | CATG| | 401, 754 |
| NlaIV | GGN|NCC | 3, 381 |
| NspI | PuCATG|Py | 755 |
| PspGI | |CC[AT]GG | 633 |
| PvuII | CAG|CTG | 149 |
| Sau3AI | |GATC | 2, 49, 137, 161, 256, 497, 765 |
| Sau96I | G|GNCC | 30, 114 |
| ScrFI | CC|NGG | 507, 633 |
| SmlI | C|TPyPuAG | 621 |
| Taqƒ¿I | T|CGA | 406, 596, 639, 777 |
| TfiI | G|A[AT]TC | 90, 119, 339, 683 |
| TseI | G|C[AT]GC | 150 |
| Tsp45I | |GT[CG]AC | 178, 436 |
| Tsp509I | |AATT | 553 |
| XbaI | T|CTAGA | 97, 543 |
| XmnI | GAANN|NNTTC | 124 |
Click here to view TAIR data
>AT1G59640.1 length:795
ATGGATCCGA GTGGGATGAT GAACGAAGGA GGACCGTTTA ATCTAGCGGA | 50 |
GATCTGGCAG TTTCCGTTGA ACGGAGTTTC AACCGCCGGA GATTCTTCTA | 100 |
GAAGAAGCTT CGTTGGACCG AATCAGTTCG GTGATGCTGA TCTAACCACA | 150 |
GCTGCTAACG GTGATCCAGC GCGTATGAGT CACGCGTTGT CTCAGGCGGT | 200 |
TATTGAAGGT ATCTCCGGCG CTTGGAAACG GAGGGAAGAT GAGTCTAAGT | 250 |
CGGCGAAGAT CGTCTCCACC ATTGGCGCTA GTGAAGGTGA GAACAAAAGA | 300 |
CAGAAGATAG ATGAAGTGTG TGATGGGAAA GCAGAAGCAG AATCGCTAGG | 350 |
AACAGAGACG GAACAAAAGA AGCAACAGAT GGAACCAACG AAAGATTATA | 400 |
TTCATGTTCG AGCTAGAAGA GGTCAAGCTA CTGATAGTCA CAGTTTAGCT | 450 |
GAAAGAGCGA GAAGAGAGAA AATAAGTGAG CGGATGAAAA TCTTGCAAGA | 500 |
TCTTGTTCCG GGATGTAACA AGGTTATTGG AAAAGCACTT GTTCTAGATG | 550 |
AGATAATTAA CTATATACAA TCATTGCAAC GTCAAGTTGA GTTCTTATCG | 600 |
ATGAAGCTTG AAGCAGTCAA CTCAAGAATG AACCCTGGTA TCGAGGTTTT | 650 |
TCCACCCAAA GAGTTTGGTC AGCAAGCGTT TGAGAATCCG GAGATACAGT | 700 |
TCGGGTCGCA GTCTACGAGG GAATACAGTA GAGGAGCATC ACCAGAGTGG | 750 |
TTGCACATGC AGATAGGATC AGGTGGTTTC GAAAGAACGT CTTGA | 800 |
>AT1G59640.1 longest ORF length:264
MDPSGMMNEG GPFNLAEIWQ FPLNGVSTAG DSSRRSFVGP NQFGDADLTT | 50 |
AANGDPARMS HALSQAVIEG ISGAWKRRED ESKSAKIVST IGASEGENKR | 100 |
QKIDEVCDGK AEAESLGTET EQKKQQMEPT KDYIHVRARR GQATDSHSLA | 150 |
ERARREKISE RMKILQDLVP GCNKVIGKAL VLDEIINYIQ SLQRQVEFLS | 200 |
MKLEAVNSRM NPGIEVFPPK EFGQQAFENP EIQFGSQSTR EYSRGASPEW | 250 |
LHMQIGSGGF ERTS | 300 |