fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G60340 NAC (No Apical Meristem) domain transcriptional regulator superfamily protein (.1)

>AT1G60340.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, KpnI, NdeI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
HpaI GTT|AAC 97
NcoI C|CATGG 260
NheI G|CTAGC 471
StyI C|C[AT][AT]GG 260, 909, 1038


Click here to view TAIR data

>AT1G60340.1 length:1116
ATGGAAGATA ACGACGCAGC TTATGATCAA GTCAAATCCG AACTGTTAAA 
50
CTCAGAAGAC GAAGTAATAA TCTCACGTTA TCTGAAGCCT ATGGTCGTTA 
100
ACGGAGATTC TTGGCCAGAT CACTTCATCG AAGACGCAAA CGTGTTCACC 
150
AAGAATCCAA ATGAGGTGTT CAATTCTGAG AGACCTAGAT TCGTTATCGT 
200
TAAACCACGA ACAGAGGCTT GTGGTAAGAC CGATGGATGT GAATCTGGTT 
250
GCTGGAGGAC CATGGGTCGT GATAAACTGA TAAAGTCGGA GGAGACTGGG 
300
AAGATTCTAG GGTTCAAGAA GATTCTCAAG TTTTGCATAA AGTGGAAACC 
350
TATAGAATAC AAGAGAAGTT GGGTAATGGA AGAGTATAGG CTTACCAATA 
400
ACTTGAACTG GAAGCAAGAT CATGTGATTT GCAAGATTCG GCTTTTGTTT 
450
GAAGCAGAAA TTAGTTTCTT GCTAGCCAAG CATTTCTACA CTACGTCAGA 
500
ATCACTTCTT CGACATGAGC TATTGCCATC TTATGGATAT TTATCCAATA 
550
CACAAGAGGA GGATGAATTT TATCTGAAGA CGATAATGAC TTCGGAAGGA 
600
AACGATTGGC CTAGCTACGT TACCAACAAC GTGTACTGTC TTCATCCATT 
650
GGAGCTTGTG GATCTTCAAG ATGTGATGTT TCAAAGTTAC GGAACCTGCA 
700
TCTTCGCTAA CGGGACTTGT GGTGAATCTG ATAAATGCGA TGGTGGTTAC 
750
TGGAAGATCC TGCACGGTGA TAAGCTGATC AAGTCAAATT TCGGGATGGT 
800
CACTGGTTTC AAGAAGGTAT TTGAGTTCTA TGAAACGGTG ATACATAGAT 
850
ATTTTTGTGA TGGAGAAGAA GTGAAGGAAG AAACAGAGAG GTTAGGTCAT 
900
CAACGTTGCC AAGGCTTGTT GTTGCCACAC CGTCGTGGCC ATGTACAAAC 
950
CAAGAGTTGC GGTGTCGTCA CCGTGAAGGA GAAGAGGAGT TTGGTAGAGC 
1000
AACCGGAGGA GATTGTCGCT GCACCTGAGA CACCACGCCA AGGAAAAAGT 
1050
GAGCATAATG ATCCACTAAA GCGAAAGAAA GCGATTGGTT GCGTGGGAGA 
1100
GAAAGCTGAG ATGTAG
1150

>AT1G60340.1 longest ORF length:371
MEDNDAAYDQ VKSELLNSED EVIISRYLKP MVVNGDSWPD HFIEDANVFT 
50
KNPNEVFNSE RPRFVIVKPR TEACGKTDGC ESGCWRTMGR DKLIKSEETG 
100
KILGFKKILK FCIKWKPIEY KRSWVMEEYR LTNNLNWKQD HVICKIRLLF 
150
EAEISFLLAK HFYTTSESLL RHELLPSYGY LSNTQEEDEF YLKTIMTSEG 
200
NDWPSYVTNN VYCLHPLELV DLQDVMFQSY GTCIFANGTC GESDKCDGGY 
250
WKILHGDKLI KSNFGMVTGF KKVFEFYETV IHRYFCDGEE VKEETERLGH 
300
QRCQGLLLPH RRGHVQTKSC GVVTVKEKRS LVEQPEEIVA APETPRQGKS 
350
EHNDPLKRKK AIGCVGEKAE M
400