Locus |
Common name |
Short description |
AT1G61110 |
ANAC025 |
NAC domain containing protein 25 (.1) |
>AT1G61110.1 CDS map
>>Show genomic map

Uncut enzymes: Acc65I, AccI, AccII(FnuDII), AccIII(BspMII), AflII, AflIII, AgeI, AhdI, AlwI, ApaI, ApaLI, ApoI, AscI, AseI, AvaII, AvrII, BaeI, BalI, BamHI, BanI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BglI, BglII, BmrI, BpmI, BsaBI, BsaI, BsaXI, BseRI, BsgI, BsiEI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BspDI, BspEI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrFI, BsrGI, BssHII, BssSI, BstAPI, BstBI, BstF5I, BstNI, BstUI, BstXI, BstZ17I, BtgI, BtrI, BtsI, Cfr10I, ClaI, DraI, DraIII, EaeI, EagI, EarI, EciI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HgaI, HincII, HindIII, HpaI, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, MspA1I, MwoI, N.BstNBI, NaeI, , NarI, NcoI, NdeI, NgoMIV, NheI, NotI, NruI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspGI, PspOMI, PstI, PvuI, PvuII, RsrII, SacI, SacII, SalI, SapI, SbfI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SnaBI, SspI, SwaI, TliI, XbaI, XcmI, XhoI, XmnI
Name |
Recognition sequence |
Cut positions |
AatII
| GACGT|C |
900 |
AciI
| C|CGC |
38, 455 |
AclI
| AA|CGTT |
707 |
AfeI
| AGC|GCT |
354 |
AluI
| AG|CT |
177, 910, 942 |
AlwNI
| CAGNNN|CTG |
116 |
Aor51HI(Eco47III)
| AGC|GCT |
354 |
AvaI
| C|PyCGPuG |
52, 230 |
BclI
| T|GATCA |
915 |
BfaI
| C|TAG |
83, 494, 632, 908 |
BlpI
| GC|TNAGC |
452 |
BsaAI
| PyAC|GTPu |
321 |
BsaHI
| GPu|CGPyC |
900 |
BsaJI
| C|CNNGG |
52, 172, 229 |
BsaWI
| [AT]|CCGG[AT] |
280 |
BsiHKAI
| G[AT]GC[AT]|C |
205 |
BslI
| CCNNNNN|NNGG |
58, 286, 384, 475 |
BsoBI
| C|PyCGPuG |
52, 230 |
Bsp1286I
| G[GAT]GC[CAT]|C |
205 |
BsrI
| ACTGGN| |
959 |
BssKI
| |CCNGG |
30, 51, 266 |
BstEII
| G|GTNACC |
434 |
BstYI
| Pu|GATCPy |
518, 576, 766 |
Bsu36I
| CC|TNAGG |
747 |
Cac8I
| GCN|NGC |
590 |
DdeI
| C|TNAG |
438, 451, 567, 746, 846, 859 |
DpnI
| GA-CH3|TC |
152, 167, 233, 403, 517, 575, 750, 765, 803, 914 |
DpnII
| |GATC |
152, 167, 233, 403, 517, 575, 750, 765, 803, 914 |
DrdI
| GACNNNN|NNGTC |
688 |
EcoNI
| CCTNN|NNNAGG |
384 |
Fnu4HI
| GC|NGC |
270, 447, 455 |
HaeII
| PuGCGC|Py |
354 |
HaeIII
| GG|CC |
27, 32, 258, 734, 742 |
HhaI
| GCG|C |
353 |
HinP1I
| G|CGC |
353 |
HinfI
| G|ANTC |
15, 114, 854 |
HpaII
| C|CGG |
29, 51, 265, 279 |
Hpy188I
| TCN|GA |
236, 699, 763, 860 |
Hpy99I
| CG[AT]CG| |
680, 898 |
HpyCH4III
| ACN|GT |
367, 682 |
HpyCH4IV
| A|CGT |
320, 706, 899 |
HpyCH4V
| TG|CA |
323, 408, 877 |
MboI
| |GATC |
152, 167, 233, 403, 517, 575, 750, 765, 803, 914 |
MseI
| T|TAA |
464, 926 |
MslI
| CAPyNN|NNPuTG |
800, 881 |
MspI
| C|CGG |
29, 51, 265, 279 |
NciI
| CC|[CG]GG |
30, 51, 266 |
NlaIII
| CATG| |
7, 406, 410, 589, 875, 917, 952 |
NlaIV
| GGN|NCC |
301 |
NsiI
| ATGCA|T |
409 |
NspI
| PuCATG|Py |
590 |
PflFI
| GACN|NNGTC |
903 |
RsaI
| GT|AC |
214, 629 |
Sau3AI
| |GATC |
152, 167, 233, 403, 517, 575, 750, 765, 803, 914 |
Sau96I
| G|GNCC |
27, 32, 734 |
ScaI
| AGT|ACT |
630 |
ScrFI
| CC|NGG |
30, 51, 266 |
SmaI
| CCC|GGG |
52 |
SmlI
| C|TPyPuAG |
100 |
SpeI
| A|CTAGT |
84 |
SphI
| GCATG|C |
590 |
StuI
| AGG|CCT |
743 |
StyI
| C|C[AT][AT]GG |
172 |
Taqƒ¿I
| T|CGA |
17, 678, 776, 839 |
TfiI
| G|A[AT]TC |
15, 114, 854 |
TseI
| G|C[AT]GC |
270 |
Tsp45I
| |GT[CG]AC |
331 |
Tsp509I
| |AATT |
611 |
TspRI
| NNCA[CG]TGNN| |
427, 445 |
Tth111I
| GACN|NNGTC |
903 |
XmaI
| C|CCGGG |
52 |
Click here to view TAIR data
>AT1G61110.1 length:972
ATGGAAAACA TGGGGGATTC GAGCATAGGG CCGGGCCATC CGCATCTCCC | 50 |
TCCCGGGTTT CGGTTTCACC CGACTGATGA GGAACTAGTA GTTCATTACC | 100 |
TCAAGAAGAA AGCAGATTCT GTTCCACTTC CAGTCTCAAT CATCGCAGAG | 150 |
ATTGATCTTT ACAAGTTTGA TCCTTGGGAG CTTCCAAGCA AGGCGAGTTT | 200 |
TGGAGAGCAC GAGTGGTACT TCTTTAGTCC TCGGGATCGG AAGTATCCAA | 250 |
ATGGGGTTAG GCCAAACCGG GCAGCAACTT CCGGTTATTG GAAAGCAACG | 300 |
GGAACCGATA AACCGATATT TACGTGCAAT AGTCACAAGG TTGGTGTCAA | 350 |
GAAAGCGCTT GTTTTTTACG GTGGAAAGCC TCCTAAAGGG ATAAAAACAG | 400 |
ATTGGATCAT GCATGAATAT CGCCTCACTG ATGGTAACCT TAGCACTGCG | 450 |
GCTAAGCCGC CTGACTTAAC CACGACAAGG AAAAACTCAC TACGGCTAGA | 500 |
CGATTGGGTT CTATGTAGGA TCTATAAGAA GAATAGTTCA CAAAGACCAA | 550 |
CAATGGAGAG AGTATTACTT AGAGAGGATC TAATGGAAGG CATGCTCTCA | 600 |
AAATCATCTG CTAATTCTTC TTCTACATCA GTACTAGACA ACAACGACAA | 650 |
CAATAATAAC AATAACGAAG AACACTTTTT CGACGGTATG GTCGTTTCTT | 700 |
CAGACAAACG TTCCTTGTGT GGTCAATACC GAATGGGCCA CGAGGCCTCA | 750 |
GGATCATCTT CATTCGGATC TTTCTTATCG AGCAAGAGGT TTCATCATAC | 800 |
AGGTGATCTC AACAATGATA ACTACAATGT CTCTTTTGTT TCGATGCTTA | 850 |
GTGAGATTCC TCAGAGTTCG GGGTTTCATG CAAATGGTGT TATGGATACG | 900 |
ACGTCGTCTC TAGCTGATCA TGGGGTTTTA AGACAGGCGT TTCAGCTTCC | 950 |
TAACATGAAC TGGCACTCAT AA | 1000 |
>AT1G61110.1 longest ORF length:323
MENMGDSSIG PGHPHLPPGF RFHPTDEELV VHYLKKKADS VPLPVSIIAE | 50 |
IDLYKFDPWE LPSKASFGEH EWYFFSPRDR KYPNGVRPNR AATSGYWKAT | 100 |
GTDKPIFTCN SHKVGVKKAL VFYGGKPPKG IKTDWIMHEY RLTDGNLSTA | 150 |
AKPPDLTTTR KNSLRLDDWV LCRIYKKNSS QRPTMERVLL REDLMEGMLS | 200 |
KSSANSSSTS VLDNNDNNNN NNEEHFFDGM VVSSDKRSLC GQYRMGHEAS | 250 |
GSSSFGSFLS SKRFHHTGDL NNDNYNVSFV SMLSEIPQSS GFHANGVMDT | 300 |
TSSLADHGVL RQAFQLPNMN WHS | 350 |
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