fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G61110 ANAC025 NAC domain containing protein 25 (.1)

>AT1G61110.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, XbaI, XhoI
Name Recognition sequence Cut positions
SmaI CCC|GGG 52
SpeI A|CTAGT 84
StyI C|C[AT][AT]GG 172


Click here to view TAIR data

>AT1G61110.1 length:972
ATGGAAAACA TGGGGGATTC GAGCATAGGG CCGGGCCATC CGCATCTCCC 
50
TCCCGGGTTT CGGTTTCACC CGACTGATGA GGAACTAGTA GTTCATTACC 
100
TCAAGAAGAA AGCAGATTCT GTTCCACTTC CAGTCTCAAT CATCGCAGAG 
150
ATTGATCTTT ACAAGTTTGA TCCTTGGGAG CTTCCAAGCA AGGCGAGTTT 
200
TGGAGAGCAC GAGTGGTACT TCTTTAGTCC TCGGGATCGG AAGTATCCAA 
250
ATGGGGTTAG GCCAAACCGG GCAGCAACTT CCGGTTATTG GAAAGCAACG 
300
GGAACCGATA AACCGATATT TACGTGCAAT AGTCACAAGG TTGGTGTCAA 
350
GAAAGCGCTT GTTTTTTACG GTGGAAAGCC TCCTAAAGGG ATAAAAACAG 
400
ATTGGATCAT GCATGAATAT CGCCTCACTG ATGGTAACCT TAGCACTGCG 
450
GCTAAGCCGC CTGACTTAAC CACGACAAGG AAAAACTCAC TACGGCTAGA 
500
CGATTGGGTT CTATGTAGGA TCTATAAGAA GAATAGTTCA CAAAGACCAA 
550
CAATGGAGAG AGTATTACTT AGAGAGGATC TAATGGAAGG CATGCTCTCA 
600
AAATCATCTG CTAATTCTTC TTCTACATCA GTACTAGACA ACAACGACAA 
650
CAATAATAAC AATAACGAAG AACACTTTTT CGACGGTATG GTCGTTTCTT 
700
CAGACAAACG TTCCTTGTGT GGTCAATACC GAATGGGCCA CGAGGCCTCA 
750
GGATCATCTT CATTCGGATC TTTCTTATCG AGCAAGAGGT TTCATCATAC 
800
AGGTGATCTC AACAATGATA ACTACAATGT CTCTTTTGTT TCGATGCTTA 
850
GTGAGATTCC TCAGAGTTCG GGGTTTCATG CAAATGGTGT TATGGATACG 
900
ACGTCGTCTC TAGCTGATCA TGGGGTTTTA AGACAGGCGT TTCAGCTTCC 
950
TAACATGAAC TGGCACTCAT AA
1000

>AT1G61110.1 longest ORF length:323
MENMGDSSIG PGHPHLPPGF RFHPTDEELV VHYLKKKADS VPLPVSIIAE 
50
IDLYKFDPWE LPSKASFGEH EWYFFSPRDR KYPNGVRPNR AATSGYWKAT 
100
GTDKPIFTCN SHKVGVKKAL VFYGGKPPKG IKTDWIMHEY RLTDGNLSTA 
150
AKPPDLTTTR KNSLRLDDWV LCRIYKKNSS QRPTMERVLL REDLMEGMLS 
200
KSSANSSSTS VLDNNDNNNN NNEEHFFDGM VVSSDKRSLC GQYRMGHEAS 
250
GSSSFGSFLS SKRFHHTGDL NNDNYNVSFV SMLSEIPQSS GFHANGVMDT 
300
TSSLADHGVL RQAFQLPNMN WHS
350