fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G61660 bHLH112 basic helix-loop-helix (bHLH) DNA-binding superfamily protein

>AT1G61660.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRI G|AATTC 636
EcoRV GAT|ATC 1026
HindIII A|AGCTT 342, 459
SacI GAGCT|C 354, 746
SpeI A|CTAGT 885
StyI C|C[AT][AT]GG 67, 378


Click here to view TAIR data

>AT1G61660.1 length:1182
ATGGCGGAGG AGTTTAAAGC TACGGCATCG ATTTGTGGTG GCGGAGGTGG 
50
CGCGTGGTGG AACTCGCCAA GGAGCGTTAT GTCTCCTTCG GATCATTTCT 
100
TGTCACCATG CTTCGGAGCG GCTATCACTT CCAATGATTT TAGCTCGCAA 
150
GAGAATCATC TCAAATCTAG GATGACTTGT ACGGACAACA ACAACATCGT 
200
TTTCGGGCAG CGAGAGGCGG ATTCTGACAG TGGAGGAAGT ACCGTGACGA 
250
TGGACTCGAC GTTGCAGATG ATGGGTCTAG GGTTTTCCTC AAATTGTTCT 
300
TCAGATTGGA ACCAAACCAT TTTACAAGAA GACTTAAACT CAAGCTTCAT 
350
AAGGAGCTCA CAAGATCAAG ATCATGGCCA AGGATTCTTA TCCACAACTA 
400
CTTCACCTTA TATACTTAAT CCAGCTTGTT CTTCATCTCC ATCAACTTCT 
450
TCGTCCTCAA GCTTGATACG AACCTTTTAC GATCCCGAAC CAAGTCCATA 
500
CAACTTTGTC TCCACCACAA GTGGTTCAAT CAACGATCCT CAACTTTCTT 
550
GGGCTAATAA GACAAATCCT CATCATCAAG TAGCTTATGG ACTAATTAAC 
600
AGCTTCTCTA ACAACGCAAA CTCTCGACCC TTTTGGAATT CTTCATCAAC 
650
CACTAACTTA AACAACACGA CGCCGAGCAA TTTTGTAACC ACTCCGCAGA 
700
TAATATCTAC TCGTTTGGAG GACAAAACCA AGAATCTGAA GACAAGAGCT 
750
CAGAGTGAGT CTTTGAAGAG AGCAAAGGAT AATGAATCTG CGGCGAAGAA 
800
ACCGAGAGTC ACCACGCCTT CACCGTTGCC AACTTTCAAG GTGAGAAAAG 
850
AGAATCTAAG GGACCAGATA ACTTCATTAC AACAACTAGT TTCACCTTTC 
900
GGAAAGACAG ATACTGCATC TGTTCTCCAA GAAGCTATAG AGTACATCAA 
950
GTTCCTTCAC GACCAAGTCA CTGTTCTAAG CACTCCATAC ATGAAACAAG 
1000
GTGCCTCGAA CCAACAACAA CAGCAGATAT CTGGTAAATC GAAGAGTCAA 
1050
GATGAAAATG AGAATCACGA ACTAAGAGGA CATGGTCTAT GTCTCGTCCC 
1100
AATATCAAGC ACGTTTCCGG TGGCTAACGA AACAACAGCC GATTTTTGGA 
1150
CACCAACGTT TGGGGGCAAC AATTTCAGGT GA
1200

>AT1G61660.1 longest ORF length:393
MAEEFKATAS ICGGGGGAWW NSPRSVMSPS DHFLSPCFGA AITSNDFSSQ 
50
ENHLKSRMTC TDNNNIVFGQ READSDSGGS TVTMDSTLQM MGLGFSSNCS 
100
SDWNQTILQE DLNSSFIRSS QDQDHGQGFL STTTSPYILN PACSSSPSTS 
150
SSSSLIRTFY DPEPSPYNFV STTSGSINDP QLSWANKTNP HHQVAYGLIN 
200
SFSNNANSRP FWNSSSTTNL NNTTPSNFVT TPQIISTRLE DKTKNLKTRA 
250
QSESLKRAKD NESAAKKPRV TTPSPLPTFK VRKENLRDQI TSLQQLVSPF 
300
GKTDTASVLQ EAIEYIKFLH DQVTVLSTPY MKQGASNQQQ QQISGKSKSQ 
350
DENENHELRG HGLCLVPISS TFPVANETTA DFWTPTFGGN NFR
400