Locus |
Common name |
Short description |
AT1G61940 |
AtTLP4 |
tubby like protein 4 (.1) |
>AT1G61940.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI
Name |
Recognition sequence |
Cut positions |
HpaI
| GTT|AAC |
130 |
StyI
| C|C[AT][AT]GG |
255 |
XhoI
| C|TCGAG |
650, 758 |
Click here to view TAIR data
>AT1G61940.1 length:798
ATGCCTCCTG AGCTTCTGAG AGATGTTCTG ATGAGGATAG AGCGATCCGA | 50 |
AGACACTTGG CCTTCTAGGA AGAATGTTGT TTCTTGTGTA GGTGTGTGTA | 100 |
AGAACTGGCG ACAAATATTC AAAGAGATCG TTAACGTTCC TGAGGTTTCT | 150 |
AGCAAATTCA CTTTTCCAAT CTCCTTGAAA CAGCCTGGTC CAGGAGGATC | 200 |
ACTTGTTCAA TGCTATGTTA AGAGAAACCG TAGCAATCAA ACTTTCTATC | 250 |
TATACCTTGG AGGTGAAGCA AAAATATTTT GTCAGTCTGA ACCAAGTGAT | 300 |
ATTTATCTCG TTCCTTACAG TTACAGAGAG ACGCATTGCG TCATGGATGC | 350 |
CATCTCTGCA TCAGCAGTAA AACCTGGAGG AACAGCTACA ACTCAGACAG | 400 |
AACTCGATAA TTTCGTGTCA TTCAGGTCTC CTTCTGGTCA AAAGGAAGGA | 450 |
GTGCTTGTTC TTAAGAGCAA AGTGCCTAGA TTGGAAGAAC AGAGCTGGTG | 500 |
TCTCGACTTC AATGGCTCTC CTGAGAACGA ACCTGAGAAT GAAAACGACA | 550 |
TTTTCCAGTT TGCGAAAGTC GGAAACTTGC ACAAACTCTT CAGTTTATAT | 600 |
GAGGCTGAAT GGATTCCTCT CGTTCGCACC TCAGTGTTTG CTGTCATTGC | 650 |
TCGAGTTTGT AGAGATAAAA AGCATACACC ATCGTATGAA TTGAAACTTG | 700 |
CATTGTACTT TGCAAAAAAC TCTGCAATCC TCAAGAAATT CGTTCTCCGC | 750 |
GGTTACACTC GAGAAGAAGA TTTACTCGCA TTGCCCGTGG CTAACTAG | 800 |
>AT1G61940.1 longest ORF length:265
MPPELLRDVL MRIERSEDTW PSRKNVVSCV GVCKNWRQIF KEIVNVPEVS | 50 |
SKFTFPISLK QPGPGGSLVQ CYVKRNRSNQ TFYLYLGGEA KIFCQSEPSD | 100 |
IYLVPYSYRE THCVMDAISA SAVKPGGTAT TQTELDNFVS FRSPSGQKEG | 150 |
VLVLKSKVPR LEEQSWCLDF NGSPENEPEN ENDIFQFAKV GNLHKLFSLY | 200 |
EAEWIPLVRT SVFAVIARVC RDKKHTPSYE LKLALYFAKN SAILKKFVLR | 250 |
GYTREEDLLA LPVAN | 300 |
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