fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G61940 AtTLP4 tubby like protein 4 (.1)

>AT1G61940.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI
Name Recognition sequence Cut positions
HpaI GTT|AAC 130
StyI C|C[AT][AT]GG 255
XhoI C|TCGAG 650, 758


Click here to view TAIR data

>AT1G61940.1 length:798
ATGCCTCCTG AGCTTCTGAG AGATGTTCTG ATGAGGATAG AGCGATCCGA 
50
AGACACTTGG CCTTCTAGGA AGAATGTTGT TTCTTGTGTA GGTGTGTGTA 
100
AGAACTGGCG ACAAATATTC AAAGAGATCG TTAACGTTCC TGAGGTTTCT 
150
AGCAAATTCA CTTTTCCAAT CTCCTTGAAA CAGCCTGGTC CAGGAGGATC 
200
ACTTGTTCAA TGCTATGTTA AGAGAAACCG TAGCAATCAA ACTTTCTATC 
250
TATACCTTGG AGGTGAAGCA AAAATATTTT GTCAGTCTGA ACCAAGTGAT 
300
ATTTATCTCG TTCCTTACAG TTACAGAGAG ACGCATTGCG TCATGGATGC 
350
CATCTCTGCA TCAGCAGTAA AACCTGGAGG AACAGCTACA ACTCAGACAG 
400
AACTCGATAA TTTCGTGTCA TTCAGGTCTC CTTCTGGTCA AAAGGAAGGA 
450
GTGCTTGTTC TTAAGAGCAA AGTGCCTAGA TTGGAAGAAC AGAGCTGGTG 
500
TCTCGACTTC AATGGCTCTC CTGAGAACGA ACCTGAGAAT GAAAACGACA 
550
TTTTCCAGTT TGCGAAAGTC GGAAACTTGC ACAAACTCTT CAGTTTATAT 
600
GAGGCTGAAT GGATTCCTCT CGTTCGCACC TCAGTGTTTG CTGTCATTGC 
650
TCGAGTTTGT AGAGATAAAA AGCATACACC ATCGTATGAA TTGAAACTTG 
700
CATTGTACTT TGCAAAAAAC TCTGCAATCC TCAAGAAATT CGTTCTCCGC 
750
GGTTACACTC GAGAAGAAGA TTTACTCGCA TTGCCCGTGG CTAACTAG
800

>AT1G61940.1 longest ORF length:265
MPPELLRDVL MRIERSEDTW PSRKNVVSCV GVCKNWRQIF KEIVNVPEVS 
50
SKFTFPISLK QPGPGGSLVQ CYVKRNRSNQ TFYLYLGGEA KIFCQSEPSD 
100
IYLVPYSYRE THCVMDAISA SAVKPGGTAT TQTELDNFVS FRSPSGQKEG 
150
VLVLKSKVPR LEEQSWCLDF NGSPENEPEN ENDIFQFAKV GNLHKLFSLY 
200
EAEWIPLVRT SVFAVIARVC RDKKHTPSYE LKLALYFAKN SAILKKFVLR 
250
GYTREEDLLA LPVAN
300