fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G62700 ANAC026, VND5 VASCULAR RELATED NAC-DOMAIN PROTEIN 5, Arabidopsis NAC domain containing protein 26 (.1)

>AT1G62700.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PvuII, SalI, SmaI, SpeI, StyI, XbaI
Name Recognition sequence Cut positions
EcoRI G|AATTC 3
EcoRV GAT|ATC 109
PstI CTGCA|G 995
SacI GAGCT|C 688
XhoI C|TCGAG 691


Click here to view TAIR data

>AT1G62700.1 length:1185
ATGAATTCGT TTTCACAAGT ACCTCCTGGC TTCAGATTTC ATCCTACTGA 
50
TGAAGAACTT GTAGACTACT ACTTGAGGAA AAAAGTTGCA TCAAAGAGAA 
100
TAGAAATCGA TATCATCAAG GATGTTGATC TTTACAAGAT TGAGCCATGT 
150
GATCTTCAAG AGTTATGCAA GATAGGAAAC GAAGAGCAGA GCGAATGGTA 
200
CTTCTTTAGT CATAAAGACA AGAAGTATCC CACGGGAACT CGAACCAATA 
250
GAGCCACGAA AGCAGGATTT TGGAAAGCCA CTGGAAGAGA CAAGGCTATA 
300
TATATAAGAC ATAGTCTTAT CGGTATGAGG AAAACACTTG TGTTTTACAA 
350
AGGAAGAGCC CCAAATGGTC AGAAATCCGA TTGGATCATG CACGAATATC 
400
GCTTAGAAAC AAGTGAAAAT GGAACCCCTC AGGAAGAAGG ATGGGTAGTA 
450
TGTAGGGTAT TCAAGAAGAA ATTGGCAGCG ACAGTGAGGA AAATGGGAGA 
500
TTACCATTCA TCACCATCGC AGCATTGGTA CGATGATCAG CTCTCTTTTA 
550
TGGCCTCCGA GATCATTTCT AGTTCTCCAC GACAGTTTCT TCCCAATCAT 
600
CATTATAACC GCCACCATCA CCAGCAGACA TTGCCTTGTG GCCTCAATGC 
650
ATTCAACAAC AACAATCCTA ACTTGCAATG CAAGCAAGAG CTCGAGTTAC 
700
ATTACAATCA AATGGTACAA CATCAACAAC AAAACCATCA TCTTCGTGAA 
750
TCTATGTTTC TCCAGCTTCC TCAGCTCGAA AGCCCTACCA GTAATTGCAA 
800
TTCTGACAAC AACAATAACA CAAGAAATAT TAGTAACTTG CAGAAATCAT 
850
CAAATATATC TCATGAGGAA CAATTGCAAC AAGGGAATCA AAGTTTCAGC 
900
TCTCTGTATT ACGATCAAGG AGTAGAGCAA ATGACTACTG ACTGGAGAGT 
950
TCTCGATAAA TTTGTTGCTT CACAGCTTAG CAATGATGAA GAGGCTGCAG 
1000
CCGTGGTTTC TTCTTCTTCT CATCAAAACA ACGTCAAGAT TGACACGAGA 
1050
AACACGGGTT ATCATGTGAT AGATGAGGGA ATAAATTTGC CGGAGAATGA 
1100
TTCTGAAAGG GTTGTTGAAA TGGGAGAAGA GTATTCAAAT GCTCATGCTG 
1150
CTTCTACTTC TTCAAGTTGT CAGATTGATC TCTAG
1200

>AT1G62700.1 longest ORF length:394
MNSFSQVPPG FRFHPTDEEL VDYYLRKKVA SKRIEIDIIK DVDLYKIEPC 
50
DLQELCKIGN EEQSEWYFFS HKDKKYPTGT RTNRATKAGF WKATGRDKAI 
100
YIRHSLIGMR KTLVFYKGRA PNGQKSDWIM HEYRLETSEN GTPQEEGWVV 
150
CRVFKKKLAA TVRKMGDYHS SPSQHWYDDQ LSFMASEIIS SSPRQFLPNH 
200
HYNRHHHQQT LPCGLNAFNN NNPNLQCKQE LELHYNQMVQ HQQQNHHLRE 
250
SMFLQLPQLE SPTSNCNSDN NNNTRNISNL QKSSNISHEE QLQQGNQSFS 
300
SLYYDQGVEQ MTTDWRVLDK FVASQLSNDE EAAAVVSSSS HQNNVKIDTR 
350
NTGYHVIDEG INLPENDSER VVEMGEEYSN AHAASTSSSC QIDL
400