fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G62975 bHLH125 basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1)

>AT1G62975.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI
Name Recognition sequence Cut positions
NdeI CA|TATG 173
XhoI C|TCGAG 618


Click here to view TAIR data

>AT1G62975.1 length:780
ATGGATTGTG TTCCTTCATT GTTTATGCCT GATTCAACCT ACGAAGATGG 
50
ATTACTATTT TCTGATTCTT TTCTTCTTTC TCCGTTTATA TCATACCAAA 
100
ACAATGATGT TTTCCATTCG ATCACAAACA AAATTGGTGG AAGCAATAAG 
150
AAACGAAGTT TGTGTGATAT AACATATGGT GCGAATGAAG CCAACAAAAA 
200
TGATGATGAT CGAGAGAGCA AGAAGATGAA ACATAGAGAC ATTGAAAGGC 
250
AAAGAAGACA AGAAGTTTCA TCTCTTTTCA AAAGACTAAG AACTCTCTTG 
300
CCATTTCAAT ATATCCAGGG TAAACGCTCG ACATCAGATC ACATCGTGCA 
350
GGCAGTGAAC TACATCAAAG ACTTACAAAT CAAAATCAAA GAACTCAACG 
400
AAAAGAGAAA TCGGGTAAAA AAAGTCATAT CGGCCACAAC TACTACTCAT 
450
TCAGCTATAG AGGAATGCAC CAGTAGTTTA TCATCATCAG CAGCATCAAC 
500
ACTATCATCA AGCTGCTCAT GTGTAGGAGA CAAACACATT ACTGTTGTGG 
550
TCACACCTTG TTTAGTTGGT GTTGAGATCA TCATAAGTTG TTGTCTCGGA 
600
CGAAACAAGT CTTGTCTCTC GAGTGTTCTT CAAATGTTAG CTCAAGAACA 
650
AAGGTTCAGT GTAGTTAGTT GCCTCTCAGC TAGACGGCAA CAGAGATTCA 
700
TGCACACCAT TGTTTCGCAG GTGGAGGATG GCAAACAGAT CAATATTTTG 
750
GAGCTTAAGG ATAAAATAAT GACTATGTAG 
800

>AT1G62975.1 longest ORF length:259
MDCVPSLFMP DSTYEDGLLF SDSFLLSPFI SYQNNDVFHS ITNKIGGSNK 
50
KRSLCDITYG ANEANKNDDD RESKKMKHRD IERQRRQEVS SLFKRLRTLL 
100
PFQYIQGKRS TSDHIVQAVN YIKDLQIKIK ELNEKRNRVK KVISATTTTH 
150
SAIEECTSSL SSSAASTLSS SCSCVGDKHI TVVVTPCLVG VEIIISCCLG 
200
RNKSCLSSVL QMLAQEQRFS VVSCLSARRQ QRFMHTIVSQ VEDGKQINIL 
250
ELKDKIMTM
300