Locus |
Common name |
Short description |
AT1G62975 |
bHLH125 |
basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1) |
>AT1G62975.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI
Name |
Recognition sequence |
Cut positions |
NdeI
| CA|TATG |
173 |
XhoI
| C|TCGAG |
618 |
Click here to view TAIR data
>AT1G62975.1 length:780
ATGGATTGTG TTCCTTCATT GTTTATGCCT GATTCAACCT ACGAAGATGG | 50 |
ATTACTATTT TCTGATTCTT TTCTTCTTTC TCCGTTTATA TCATACCAAA | 100 |
ACAATGATGT TTTCCATTCG ATCACAAACA AAATTGGTGG AAGCAATAAG | 150 |
AAACGAAGTT TGTGTGATAT AACATATGGT GCGAATGAAG CCAACAAAAA | 200 |
TGATGATGAT CGAGAGAGCA AGAAGATGAA ACATAGAGAC ATTGAAAGGC | 250 |
AAAGAAGACA AGAAGTTTCA TCTCTTTTCA AAAGACTAAG AACTCTCTTG | 300 |
CCATTTCAAT ATATCCAGGG TAAACGCTCG ACATCAGATC ACATCGTGCA | 350 |
GGCAGTGAAC TACATCAAAG ACTTACAAAT CAAAATCAAA GAACTCAACG | 400 |
AAAAGAGAAA TCGGGTAAAA AAAGTCATAT CGGCCACAAC TACTACTCAT | 450 |
TCAGCTATAG AGGAATGCAC CAGTAGTTTA TCATCATCAG CAGCATCAAC | 500 |
ACTATCATCA AGCTGCTCAT GTGTAGGAGA CAAACACATT ACTGTTGTGG | 550 |
TCACACCTTG TTTAGTTGGT GTTGAGATCA TCATAAGTTG TTGTCTCGGA | 600 |
CGAAACAAGT CTTGTCTCTC GAGTGTTCTT CAAATGTTAG CTCAAGAACA | 650 |
AAGGTTCAGT GTAGTTAGTT GCCTCTCAGC TAGACGGCAA CAGAGATTCA | 700 |
TGCACACCAT TGTTTCGCAG GTGGAGGATG GCAAACAGAT CAATATTTTG | 750 |
GAGCTTAAGG ATAAAATAAT GACTATGTAG | 800 |
>AT1G62975.1 longest ORF length:259
MDCVPSLFMP DSTYEDGLLF SDSFLLSPFI SYQNNDVFHS ITNKIGGSNK | 50 |
KRSLCDITYG ANEANKNDDD RESKKMKHRD IERQRRQEVS SLFKRLRTLL | 100 |
PFQYIQGKRS TSDHIVQAVN YIKDLQIKIK ELNEKRNRVK KVISATTTTH | 150 |
SAIEECTSSL SSSAASTLSS SCSCVGDKHI TVVVTPCLVG VEIIISCCLG | 200 |
RNKSCLSSVL QMLAQEQRFS VVSCLSARRQ QRFMHTIVSQ VEDGKQINIL | 250 |
ELKDKIMTM | 300 |
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