fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G63100 GRAS family transcription factor (.1)

>AT1G63100.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, HpaI, KpnI, NcoI, NdeI, NotI, PacI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRI G|AATTC 1024
HindIII A|AGCTT 274, 962, 1212
NheI G|CTAGC 585
PstI CTGCA|G 626


Click here to view TAIR data

>AT1G63100.1 length:1977
ATGTTGGCAG GTTGTTCGAG TTCATCATTG TTGTCGCCTA CTCGAAGATT 
50
GAGGAGTGAA GCAGTAGCAG CAACATCAGC AACAGTATCA GCGCATTTTC 
100
CCATGAACAC ACAGAGATTG GACTTACCAT GCAGTAGTAG CTTCTCTCGC 
150
AAGGAAACTC CTTCTAGCAG ACCACTTGGA AGAAGCATCT CTCTTGACAA 
200
CAGCAACAAC AACAACAACA AACCGATCGA GCGCAAGACG AAGACCAGTG 
250
GTTGTTCGCT TAAACAGAAC ATAAAGCTTC CACCTTTGGC AACAACAAGA 
300
GGAAATGGAG AAGGGTTTTC TTGGAACAAC GACAACAACA ACAGAGGGAA 
350
GAGTTTGAAG AGATTAGCTG AGGAGGACGA GTCTTGTTTG AGCAGAGCGA 
400
AGAGGACAAA ATGCGAAAAC GAAGGTGGTT TCTGGTTTGA GCATTTCACT 
450
GGCCAGGATT CTTCTTCACC AGCATTACCT TTTTCTTTGA CTTGTTCAGG 
500
TGATGATGAG GAAAAGGTTT GCTTTGTGCC AAGTGAAGTC ATTTCTCAGC 
550
CTTTACCAAA CTGGGTTGAT TCGGTGATTA CGGAGCTAGC TGGTATAGGC 
600
GATAAGGACG TTGAGAGTAG CCTTCCTGCA GCAGTTAAGG AAGCATCTGG 
650
AGGATCATCT ACAAGCGCAT CATCCGAGAG TCGTAGCTTA AGCCATAGAG 
700
TACCAGAACC TACAAATGGC TCAAGGAATC CGTACTCACA CCGCGGTGCA 
750
ACAGAGGAAA GGACCACCGG AAACATCAAC AACAACAACA ACAGGAACGA 
800
TTTGCAGAGG GATTTCGAGC TTGTCAATTT GCTTACGGGA TGCTTAGACG 
850
CGATCAGATC AAGAAACATA GCAGCGATTA ACCATTTCAT TGCAAGAACC 
900
GGTGATCTTG CTTCTCCTAG AGGAAGAACA CCAATGACTC GCCTCATAGC 
950
TTACTACATT GAAGCTTTGG CTCTAAGAGT GGCGCGTATG TGGCCTCACA 
1000
TCTTCCACAT CGCACCCCCT CGTGAATTCG ATAGAACTGT CGAAGATGAA 
1050
TCAGGAAATG CATTGAGGTT CTTGAATCAA GTAACCCCAA TTCCAAAGTT 
1100
CATTCATTTC ACAGCCAACG AGATGTTACT CAGAGCATTT GAAGGGAAAG 
1150
AGAGAGTTCA CATTATTGAC TTCGACATCA AGCAAGGTTT ACAGTGGCCT 
1200
AGCTTCTTCC AAAGCTTAGC TTCGAGAATA AATCCACCAC ACCATGTACG 
1250
AATCACTGGG ATCGGAGAAT CGAAACTTGA GCTAAACGAA ACCGGAGATC 
1300
GCCTCCACGG ATTTGCAGAG GCGATGAATC TTCAATTCGA GTTTCATCCT 
1350
GTAGTTGATA GACTCGAAGA CGTTAGACTA TGGATGCTTC ACGTCAAAGA 
1400
AGGTGAATCA GTAGCTGTAA ACTGTGTCAT GCAGATGCAC AAGACACTCT 
1450
ACGATGGAAC CGGAGCAGCA ATTAGGGATT TTTTGGGTTT AATCAGAAGC 
1500
ACAAACCCAA TAGCTCTCGT TCTTGCGGAG CAAGAAGCAG AACACAACTC 
1550
AGAGCAACTT GAGACACGAG TTTGTAACTC GCTAAAGTAC TATTCAGCTA 
1600
TGTTTGATGC AATTCACACG AATCTTGCTA CAGATAGCTT AATGAGAGTC 
1650
AAAGTTGAGG AGATGTTGTT TGGGAGAGAG ATCAGGAACA TTGTTGCGTG 
1700
TGAAGGAAGT CATAGACAAG AGAGGCATGT GGGTTTTCGT CATTGGAGGA 
1750
GGATGTTGGA GCAGTTAGGG TTTCGGAGTC TTGGAGTCTC GGAGAGAGAG 
1800
GTTTTGCAGA GTAAGATGTT GCTTAGGATG TACGGATCTG ATAATGAAGG 
1850
GTTTTTCAAT GTGGAGAGGA GCGATGAAGA CAACGGCGGT GAAGGCGGAC 
1900
GCGGCGGTGG AGTTACTTTA CGGTGGTCGG AGCAGCCACT TTATACGATC 
1950
TCGGCTTGGA CTACCGGAGG GAATTAA
2000

>AT1G63100.1 longest ORF length:658
MLAGCSSSSL LSPTRRLRSE AVAATSATVS AHFPMNTQRL DLPCSSSFSR 
50
KETPSSRPLG RSISLDNSNN NNNKPIERKT KTSGCSLKQN IKLPPLATTR 
100
GNGEGFSWNN DNNNRGKSLK RLAEEDESCL SRAKRTKCEN EGGFWFEHFT 
150
GQDSSSPALP FSLTCSGDDE EKVCFVPSEV ISQPLPNWVD SVITELAGIG 
200
DKDVESSLPA AVKEASGGSS TSASSESRSL SHRVPEPTNG SRNPYSHRGA 
250
TEERTTGNIN NNNNRNDLQR DFELVNLLTG CLDAIRSRNI AAINHFIART 
300
GDLASPRGRT PMTRLIAYYI EALALRVARM WPHIFHIAPP REFDRTVEDE 
350
SGNALRFLNQ VTPIPKFIHF TANEMLLRAF EGKERVHIID FDIKQGLQWP 
400
SFFQSLASRI NPPHHVRITG IGESKLELNE TGDRLHGFAE AMNLQFEFHP 
450
VVDRLEDVRL WMLHVKEGES VAVNCVMQMH KTLYDGTGAA IRDFLGLIRS 
500
TNPIALVLAE QEAEHNSEQL ETRVCNSLKY YSAMFDAIHT NLATDSLMRV 
550
KVEEMLFGRE IRNIVACEGS HRQERHVGFR HWRRMLEQLG FRSLGVSERE 
600
VLQSKMLLRM YGSDNEGFFN VERSDEDNGG EGGRGGGVTL RWSEQPLYTI 
650
SAWTTGGN
700