fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G63480 AT hook motif DNA-binding family protein (.1)

>AT1G63480.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, SacI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 700
PvuII CAG|CTG 464, 935
SalI G|TCGAC 401


Click here to view TAIR data

>AT1G63480.1 length:1086
ATGGACGGAA GAGAAGCAAT GGCATTTCCA GGCTCGCATT CTCAGTACTA 
50
TCTTCAAAGA GGAGCCTTTA CTAATCTCGC ACCTTCCCAA GTCGCGAGTG 
100
GGCTTCACGC GCCGCCGCCA CATACGGGAT TGAGGCCAAT GTCTAACCCT 
150
AACATTCATC ACCCTCAGGC TAACAATCCA GGACCTCCTT TCTCGGATTT 
200
TGGACACACC ATTCACATGG GAGTGGTCTC CTCTGCTTCT GATGCTGATG 
250
TGCAACCGCC ACCGCCACCG CCACCACCAG AGGAACCGAT GGTTAAGAGG 
300
AAACGTGGAC GGCCAAGAAA GTATGGAGAA CCGATGGTTA GTAATAAGTC 
350
TAGGGACTCT TCTCCAATGT CTGATCCTAA TGAACCTAAA CGGGCCAGAG 
400
GTCGACCTCC TGGAACTGGA AGGAAGCAAC GCTTGGCTAA TCTTGGTGAG 
450
TGGATGAATA CTTCAGCTGG ACTTGCTTTT GCACCTCATG TGATCAGCAT 
500
TGGAGCAGGA GAAGACATTG CTGCGAAAGT TTTGTCATTT TCACAACAAA 
550
GACCTCGGGC TCTTTGTATA ATGTCAGGCA CTGGAACCAT TTCTTCAGTC 
600
ACTCTGTGCA AACCCGGTTC AACCGATCGT CACTTAACAT ACGAGGGACC 
650
TTTTGAGATT ATAAGTTTTG GTGGATCTTA TTTGGTGAAT GAAGAAGGTG 
700
GATCCAGAAG TCGAACAGGC GGATTGAGTG TCTCTCTTTC TCGTCCCGAT 
750
GGTAGTATTA TTGCCGGTGG AGTTGACATG CTTATCGCAG CCAACCTTGT 
800
TCAGGTGGTG GCATGTAGTT TTGTATACGG AGCAAGGGCA AAGACTCATA 
850
ATAACAATAA CAAGACCATC AGACAAGAAA AGGAACCAAA TGAAGAGGAC 
900
AACAATAGTG AAATGGAGAC CACACCGGGT AGTGCAGCTG AACCAGCAGC 
950
ATCTGCGGGT CAGCAGACGC CACAGAACTT CTCTTCTCAG GGAATAAGGG 
1000
GGTGGCCCGG TTCAGGCTCA GGCTCTGGCA GATCACTTGA CATTTGCAGA 
1050
AACCCACTCA CTGATTTTGA TTTGACTCGT GGATGA
1100

>AT1G63480.1 longest ORF length:361
MDGREAMAFP GSHSQYYLQR GAFTNLAPSQ VASGLHAPPP HTGLRPMSNP 
50
NIHHPQANNP GPPFSDFGHT IHMGVVSSAS DADVQPPPPP PPPEEPMVKR 
100
KRGRPRKYGE PMVSNKSRDS SPMSDPNEPK RARGRPPGTG RKQRLANLGE 
150
WMNTSAGLAF APHVISIGAG EDIAAKVLSF SQQRPRALCI MSGTGTISSV 
200
TLCKPGSTDR HLTYEGPFEI ISFGGSYLVN EEGGSRSRTG GLSVSLSRPD 
250
GSIIAGGVDM LIAANLVQVV ACSFVYGARA KTHNNNNKTI RQEKEPNEED 
300
NNSEMETTPG SAAEPAASAG QQTPQNFSSQ GIRGWPGSGS GSGRSLDICR 
350
NPLTDFDLTR G
400