Locus |
Common name |
Short description |
AT1G64620 |
AtDof1,8 |
Dof-type zinc finger DNA-binding family protein (.1) |
>AT1G64620.1 CDS map
>>Show genomic map

Uncut enzymes: AatII, Acc65I, AccII(FnuDII), AccIII(BspMII), AclI, AfeI, AflII, AflIII, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, ApoI, AscI, AseI, AvaI, AvrII, BaeI, BalI, BanI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BglI, BlpI, BmrI, BpmI, BsaAI, BsaBI, BsaI, BsaXI, BseRI, BsgI, BsiEI, BsiHKAI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, Bsp1286I, BspDI, BspEI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrFI, BsrGI, BssHII, BssSI, BstAPI, BstBI, BstEII, BstF5I, BstUI, BstZ17I, BtgI, BtrI, BtsI, Cac8I, Cfr10I, ClaI, DraI, DraIII, DrdI, EaeI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HgaI, HhaI, HinP1I, HincII, HindIII, HpaI, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, MspA1I, N.BstNBI, NaeI, , NarI, NcoI, NdeI, NgoMIV, NheI, NotI, NruI, NsiI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspOMI, PvuI, PvuII, RsrII, SacI, SacII, SalI, SapI, SbfI, ScaI, SexAI, SfaNI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, SspI, StuI, StyI, SwaI, TliI, Tth111I, XbaI, XcmI, XhoI, XmaI, XmnI
Name |
Recognition sequence |
Cut positions |
AccI
| GT|[AC][TG]AC |
712 |
AciI
| C|CGC |
249, 292, 432 |
AluI
| AG|CT |
627, 769, 976 |
AvaII
| G|G[AT]CC |
247, 820 |
BamHI
| G|GATCC |
798 |
BclI
| T|GATCA |
948 |
BfaI
| C|TAG |
642 |
BglII
| A|GATCT |
307, 495 |
BsaHI
| GPu|CGPyC |
289 |
BsaJI
| C|CNNGG |
214 |
BsaWI
| [AT]|CCGG[AT] |
126 |
BslI
| CCNNNNN|NNGG |
282, 420, 774 |
BspHI
| T|CATGA |
699, 761, 951 |
BsrI
| ACTGGN| |
603 |
BssKI
| |CCNGG |
137, 214, 724 |
BstNI
| CC|[AT]GG |
137, 214 |
BstXI
| CCANNNNN|NTGG |
990 |
BstYI
| Pu|GATCPy |
307, 495, 638, 798 |
Bsu36I
| CC|TNAGG |
20, 265 |
DdeI
| C|TNAG |
19, 264, 415, 735 |
DpnI
| GA-CH3|TC |
49, 306, 494, 526, 637, 797, 947 |
DpnII
| |GATC |
49, 306, 494, 526, 637, 797, 947 |
Fnu4HI
| GC|NGC |
209, 286, 429, 580, 851, 1029 |
HaeIII
| GG|CC |
15, 843 |
HinfI
| G|ANTC |
83, 702, 778 |
HpaII
| C|CGG |
125, 723 |
Hpy188I
| TCN|GA |
734, 920 |
Hpy99I
| CG[AT]CG| |
278 |
HpyCH4III
| ACN|GT |
77, 148, 544, 746 |
HpyCH4IV
| A|CGT |
455, 805 |
HpyCH4V
| TG|CA |
158, 233, 564, 1033 |
MboI
| |GATC |
49, 306, 494, 526, 637, 797, 947 |
MseI
| T|TAA |
167, 408, 489, 1010 |
MslI
| CAPyNN|NNPuTG |
956 |
MspI
| C|CGG |
125, 723 |
MwoI
| GCNNNNN|NNGC |
292, 851, 1029 |
NciI
| CC|[CG]GG |
724 |
NlaIII
| CATG| |
63, 679, 698, 760, 950, 956, 1006, 1047 |
NlaIV
| GGN|NCC |
259, 798, 820 |
NspI
| PuCATG|Py |
64, 1007 |
PspGI
| |CC[AT]GG |
137, 214 |
PstI
| CTGCA|G |
234 |
RsaI
| GT|AC |
217, 572 |
Sau3AI
| |GATC |
49, 306, 494, 526, 637, 797, 947 |
Sau96I
| G|GNCC |
247, 820 |
ScrFI
| CC|NGG |
137, 214, 724 |
SfcI
| C|TPuPyAG |
198, 234 |
SmlI
| C|TPyPuAG |
464, 515 |
Taqƒ¿I
| T|CGA |
80 |
TfiI
| G|A[AT]TC |
83, 702, 778 |
TseI
| G|C[AT]GC |
209, 429, 580, 851, 1029 |
Tsp45I
| |GT[CG]AC |
54, 532 |
Tsp509I
| |AATT |
317 |
TspRI
| NNCA[CG]TGNN| |
7, 603, 826 |
Click here to view TAIR data
>AT1G64620.1 length:1059
ATGGACACTG CTAAATGGCC TCAGGAGTTT GTTGTGAAGC CAATGAACGA | 50 |
GATCGTGACA AACACATGCC TAAAACAACA GTCGAATCCT CCTTCTCCTG | 100 |
CTACTCCTGT GGAAAGGAAG GCAAGACCGG AGAAAGACCA GGCTTTGAAC | 150 |
TGTCCAAGAT GCAACTCCTT AAACACCAAG TTCTGTTACT ACAACAACTA | 200 |
CAGCCTGACG CAGCCCAGGT ACTTTTGTAA AGACTGCAGG AGGTATTGGA | 250 |
CCGCAGGTGG TTCCCTCAGG AACATCCCCG TCGGTGGCGG CGTCCGCAAG | 300 |
AACAAGAGAT CTTCTTCCAA TTCCTCTTCC TCTTCACCCT CTTCGTCTTC | 350 |
TTCTTCAAAG AAACCTCTTT TTGCCAACAA CAACACGCCT ACGCCTCCTC | 400 |
TTCCTCATCT TAACCCTAAG ATTGGTGAAG CAGCCGCTAC TAAAGTTCAA | 450 |
GACTTGACGT TTTCTCAAGG GTTTGGGAAC GCCCACGAGG TTAAAGATCT | 500 |
CAACTTGGCG TTTTCTCAAG GGTTTGGGAT CGGTCACAAT CATCACAGTA | 550 |
GTATCCCAGA GTTTCTGCAA GTAGTACCCA GCAGCAGTAT GAAGAACAAC | 600 |
CCACTGGTCT CAACTTCCTC GTCTTTGGAG CTTTTAGGGA TCTCTAGTTC | 650 |
CTCTGCTTCC TCTAACTCAC GCCCTGCTTT CATGTCTTAT CCAAATGTTC | 700 |
ATGATTCATC GGTCTACACA GCATCCGGGT TTGGTCTGAG TTACCCACAG | 750 |
TTTCAAGAGT TCATGAGACC AGCTTTGGGA TTCTCTCTTG ATGGTGGGGA | 800 |
TCCTCTACGT CAAGAAGAGG GGTCCAGTGG CACTAATAAT GGAAGGCCGT | 850 |
TGCTGCCATT TGAGAGCCTC CTCAAACTTC CAGTTTCATC ATCAAGCACC | 900 |
AATAGTGGTG GGAATGGCAA TCTGAAAGAG AATAATGATG AGCATAGTGA | 950 |
TCATGAACAT GAGAAAGAAG AAGGAGAAGC TGACCAATCT GTTGGGTTTT | 1000 |
GGAGTGGCAT GTTAAGTGCT GGTGCTTCTG CTGCTGCATC TGGTGGTTCA | 1050 |
TGGCAATAA | 1100 |
>AT1G64620.1 longest ORF length:352
MDTAKWPQEF VVKPMNEIVT NTCLKQQSNP PSPATPVERK ARPEKDQALN | 50 |
CPRCNSLNTK FCYYNNYSLT QPRYFCKDCR RYWTAGGSLR NIPVGGGVRK | 100 |
NKRSSSNSSS SSPSSSSSSK KPLFANNNTP TPPLPHLNPK IGEAAATKVQ | 150 |
DLTFSQGFGN AHEVKDLNLA FSQGFGIGHN HHSSIPEFLQ VVPSSSMKNN | 200 |
PLVSTSSSLE LLGISSSSAS SNSRPAFMSY PNVHDSSVYT ASGFGLSYPQ | 250 |
FQEFMRPALG FSLDGGDPLR QEEGSSGTNN GRPLLPFESL LKLPVSSSST | 300 |
NSGGNGNLKE NNDEHSDHEH EKEEGEADQS VGFWSGMLSA GASAAASGGS | 350 |
WQ | 400 |
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