fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G65910 ANAC028 NAC domain containing protein 28 (.1)

>AT1G65910.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HindIII, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI
Name Recognition sequence Cut positions
EcoRV GAT|ATC 1190
HpaI GTT|AAC 1243
NcoI C|CATGG 501, 987, 1386
StyI C|C[AT][AT]GG 142, 501, 987, 1386
XbaI T|CTAGA 948
XhoI C|TCGAG 206, 1282, 1686


Click here to view TAIR data

>AT1G65910.1 length:1896
ATGGCTCCTG TTTCAATGCC TCCAGGTTTC CGGTTTCATC CAACAGACGA 
50
AGAGCTTGTC ATATACTACC TCAAGCGAAA GATTAATGGT CGGACTATTG 
100
AGTTAGAGAT AATACCCGAG ATTGATCTTT ACAAATGCGA ACCTTGGGAT 
150
TTACCTGGGA AGTCCTTGCT GCCAAGTAAA GACCTAGAAT GGTTCTTTTT 
200
CAGTCCTCGA GACCGGAAAT ATCCAAACGG ATCAAGAACA AACCGGGCGA 
250
CCAAAGCAGG TTACTGGAAA GCCACCGGGA AAGATCGTAA AGTGACTTCA 
300
CATTCACGGA TGGTTGGAAC AAAGAAAACA TTAGTTTATT ACCGAGGAAG 
350
AGCGCCTCAT GGCTCTCGTA CCGATTGGGT CATGCACGAG TACCGTCTTG 
400
AAGAACAAGA ATGTGACTCT AAATCCGGTA TACAGGATGC CTATGCACTT 
450
TGTCGAGTAT TTAAGAAGAG TGCTTTAGCC AACAAAATTG AAGAACAACA 
500
CCATGGTACG AAGAAGAACA AAGGAACGAC TAATAGTGAA CAATCTACTT 
550
CTAGTACTTG TTTGTATTCT GATGGAATGT ATGAAAACCT CGAAAACTCG 
600
GGGTATCCAG TCTCACCTGA GACAGGAGGC TTAACTCAAC TCGGTAATAA 
650
TTCGTCGTCG GATATGGAAA CGATAGAGAA TAAATGGAGT CAGTTTATGT 
700
CGCATGACAC GTCCTTCAAC TTCCCACCTC AGTCTCAATA TGGAACAATC 
750
TCATATCCTC CCTCGAAGGT TGATATAGCG TTAGAGTGTG CAAGACTACA 
800
AAATCGTATG TTGCCACCAG TACCACCACT TTACGTAGAA GGTCTCACAC 
850
ACAATGAATA TTTTGGAAAC AATGTAGCTA ACGATACAGA TGAAATGTTG 
900
AGCAAGATTA TAGCATTGGC TCAAGCCTCA CATGAGCCAC GAAACAGTCT 
950
AGACTCATGG GACGGTGGTT CTGCTTCCGG GAACTTCCAT GGAGACTTTA 
1000
ACTATTCCGG AGAAAAAGTC TCATGCCTAG AGGCGAACGT GGAGGCTGTA 
1050
GATATGCAAG AACACCATGT GAATTTTAAG GAAGAAAGAC TTGTTGAAAA 
1100
CTTGAGATGG GTAGGAGTAT CAAGCAAGGA ACTTGAAAAG AGCTTCGTTG 
1150
AAGAACACTC AACGGTAATT CCTATAGAAG ATATTTGGAG ATATCATAAT 
1200
GATAATCAAG AACAAGAACA TCATGATCAA GATGGTATGG ACGTTAACAA 
1250
CAACAATGGA GATGTGGATG ATGCTTTCAC ACTCGAGTTT TCGGAAAACG 
1300
AACATAACGA GAATCTTTTG GACAAGAACG ATCATGAGAC AACGAGTTCC 
1350
TCATGTTTTG AGGTGGTAAA AAAAGTTGAG GTTAGCCATG GATTGTTTGT 
1400
CACAACTCGT CAGGTAACCA ACACATTCTT CCAACAGATA GTACCATCGC 
1450
AAACCGTTAT AGTTTATATA AATCCGACGG ATGGCAATGA GTGTTGTCAT 
1500
AGTATGACAT CAAAAGAGGA GGTTCATGTC CGTAAAAAGA TAAATCCGCG 
1550
AATCAACGGA GTAAGCTCAA CAGTTCTTGG ACAATGGAGA AAATTCGCGC 
1600
ATGTTATTGG CTTCATTCCT ATGCTTCTAT TGATGCGTTG TGTTCATCGA 
1650
GGTAACTCTA ACAAAAACAG AGGCAGTGAA GGTTACTCGA GGCAGCCTAC 
1700
GAGAGGAGAT TGTAACAATC GGGGAACAAT ACTCATGATG GAAAATGCTG 
1750
TCGTGAGAAG AAAAATTTGG AAGAAGAAGA AAGAGAAAAA TATGGTTGAC 
1800
GAACAAGGTT TTCGGTTTCA AGATAGTTTC GTATTGAAGA AGTTGGGGCT 
1850
TTCTCTTGCT ATCATCTTAG CTGTTTCTAC CATAAGTCTT ATTTGA
1900

>AT1G65910.1 longest ORF length:631
MAPVSMPPGF RFHPTDEELV IYYLKRKING RTIELEIIPE IDLYKCEPWD 
50
LPGKSLLPSK DLEWFFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVTS 
100
HSRMVGTKKT LVYYRGRAPH GSRTDWVMHE YRLEEQECDS KSGIQDAYAL 
150
CRVFKKSALA NKIEEQHHGT KKNKGTTNSE QSTSSTCLYS DGMYENLENS 
200
GYPVSPETGG LTQLGNNSSS DMETIENKWS QFMSHDTSFN FPPQSQYGTI 
250
SYPPSKVDIA LECARLQNRM LPPVPPLYVE GLTHNEYFGN NVANDTDEML 
300
SKIIALAQAS HEPRNSLDSW DGGSASGNFH GDFNYSGEKV SCLEANVEAV 
350
DMQEHHVNFK EERLVENLRW VGVSSKELEK SFVEEHSTVI PIEDIWRYHN 
400
DNQEQEHHDQ DGMDVNNNNG DVDDAFTLEF SENEHNENLL DKNDHETTSS 
450
SCFEVVKKVE VSHGLFVTTR QVTNTFFQQI VPSQTVIVYI NPTDGNECCH 
500
SMTSKEEVHV RKKINPRING VSSTVLGQWR KFAHVIGFIP MLLLMRCVHR 
550
GNSNKNRGSE GYSRQPTRGD CNNRGTILMM ENAVVRRKIW KKKKEKNMVD 
600
EQGFRFQDSF VLKKLGLSLA IILAVSTISL I
650