Locus |
Common name |
Short description |
AT1G66350 |
RGL1 |
RGA-like 1 (.1) |
>AT1G66350.1 CDS map
>>Show genomic map

Uncut enzymes: AatII, AccI, AccIII(BspMII), AclI, AfeI, AflII, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaLI, AscI, AseI, BaeI, BalI, BamHI, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BglI, BglII, BlpI, BmrI, BpmI, BsaBI, BsaHI, BsaI, BsaXI, BseRI, BsgI, BsiWI, BslI, BsmAI, BsmBI, BsmFI, BsmI, BspEI, BspHI, BspMI, BsrBI, BsrDI, BsrGI, BssHII, BstEII, BstXI, BstZ17I, Bsu36I, BtrI, DraIII, DrdI, EagI, EarI, EciI, EcoNI, EcoRV, FauI, FokI, FseI, HaeII, HgaI, HphI, I-CeuI, I-SceI, KasI, MboII, MfeI, MlyI, MnlI, MscI, MspA1I, , NarI, NdeI, NheI, NotI, NsiI, PI-PspI, PI-SceI(VDE), PacI, PciI, PflMI, PleI, PmeI, PpuMI, PsiI, PvuII, RsrII, SacI, SacII, SalI, SapI, SbfI, SexAI, SfaNI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SspI, StuI, SwaI, XbaI, XcmI, XmaI
Name |
Recognition sequence |
Cut positions |
Acc65I
| G|GTACC |
1153 |
AccII(FnuDII)
| CG|CG |
408, 460, 514, 541, 574, 637, 1387, 1485 |
AciI
| C|CGC |
30, 1223, 1490 |
AflIII
| A|CPuPyGT |
1388 |
AgeI
| A|CCGGT |
1343, 1368 |
AluI
| AG|CT |
79, 96, 156, 319, 469, 481, 553, 814, 912, 1041, 1057, 1199 |
ApaI
| GGGCC|C |
1221 |
ApoI
| Pu|AATTPy |
943 |
AvaI
| C|PyCGPuG |
626, 1216 |
AvaII
| G|G[AT]CC |
837 |
AvrII
| C|CTAGG |
1260 |
BanI
| G|GPyPuCC |
1153 |
BanII
| GPuGCPy|C |
1221 |
BfaI
| C|TAG |
992, 1259 |
BsaAI
| PyAC|GTPu |
347, 358, 529 |
BsaJI
| C|CNNGG |
786, 1260, 1427 |
BsaWI
| [AT]|CCGG[AT] |
843, 984, 1110, 1343, 1368 |
BsiEI
| CGPuPy|CG |
1108, 1167, 1489 |
BsiHKAI
| G[AT]GC[AT]|C |
10, 355 |
BsoBI
| C|PyCGPuG |
626, 1216 |
Bsp1286I
| G[GAT]GC[CAT]|C |
10, 355, 1221 |
BspDI
| AT|CGAT |
1075 |
BspT107I(HgiCI)
| G|G[TC][AG]CC |
1153 |
BsrFI
| Pu|CCGGPy |
801, 1343, 1368 |
BsrI
| ACTGGN| |
442 |
BssKI
| |CCNGG |
280, 327, 859, 1005, 1065, 1304, 1426 |
BssSI
| C|TCGTG |
520 |
BstAPI
| GCANNNN|NTGC |
1422, 1506 |
BstBI
| TT|CGAA |
940, 1383 |
BstF5I
| GGATGNN| |
1478 |
BstNI
| CC|[AT]GG |
327 |
BstUI
| CG|CG |
408, 460, 514, 541, 574, 637, 1387, 1485 |
BstYI
| Pu|GATCPy |
267 |
BtgI
| C|CPuPyGG |
786 |
BtsI
| GCAGTGNN| |
339 |
Cac8I
| GCN|NGC |
257, 597, 801, 915, 1223, 1288, 1398 |
Cfr10I
| [AG]|CCGG[TC] |
801, 1343, 1368 |
ClaI
| AT|CGAT |
1075 |
DdeI
| C|TNAG |
302, 315, 1055 |
DpnI
| GA-CH3|TC |
126, 233, 266, 311, 862, 974, 1166 |
DpnII
| |GATC |
126, 233, 266, 311, 862, 974, 1166 |
DraI
| TTT|AAA |
960, 1326, 1363 |
EaeI
| Py|GGCCPu |
799 |
EcoO109I
| PuG|GNCCPy |
1221 |
EcoRI
| G|AATTC |
943 |
Fnu4HI
| GC|NGC |
81 |
FspI
| TGC|GCA |
705 |
HaeIII
| GG|CC |
798, 1220 |
HhaI
| GCG|C |
409, 461, 515, 704 |
HinP1I
| G|CGC |
409, 461, 515, 704 |
HincII
| GTPy|PuAC |
91, 855, 876, 1027 |
HindIII
| A|AGCTT |
157 |
HinfI
| G|ANTC |
24, 190, 197, 284, 300, 362, 390, 429, 668, 681, 719, 809, 1014, 1179, 1209, 1516 |
HpaI
| GTT|AAC |
855, 876, 1027 |
HpaII
| C|CGG |
33, 84, 280, 800, 842, 858, 983, 1005, 1065, 1109, 1303, 1342, 1367, 1425 |
Hpy188I
| TCN|GA |
132, 204, 231, 264, 303, 368, 393, 654, 665, 972, 1105, 1248 |
Hpy99I
| CG[AT]CG| |
61, 366, 512 |
HpyCH4III
| ACN|GT |
19, 63, 164, 213, 613, 1122, 1150, 1155 |
HpyCH4IV
| A|CGT |
144, 346, 357, 528, 826 |
HpyCH4V
| TG|CA |
334, 1498 |
KpnI
| GGTAC|C |
1153 |
MboI
| |GATC |
126, 233, 266, 311, 862, 974, 1166 |
MluI
| A|CGCGT |
1388 |
MseI
| T|TAA |
69, 780, 854, 875, 959, 978, 1026, 1325, 1362 |
MslI
| CAPyNN|NNPuTG |
677, 1509 |
MspI
| C|CGG |
33, 84, 280, 800, 842, 858, 983, 1005, 1065, 1109, 1303, 1342, 1367, 1425 |
MwoI
| GCNNNNN|NNGC |
147, 468, 524, 723, 1228, 1422, 1478, 1506 |
N.BstNBI
| GAGTCNNNN|N |
686 |
NaeI
| GCC|GGC |
801 |
NciI
| CC|[CG]GG |
280, 859, 1005, 1065, 1304, 1426 |
NcoI
| C|CATGG |
786 |
NgoMIV
| G|CCGGC |
801 |
NlaIII
| CATG| |
136, 256, 761, 785, 1287, 1316, 1405 |
NlaIV
| GGN|NCC |
1069, 1153, 1221 |
NruI
| TCG|CGA |
575 |
NspI
| PuCATG|Py |
257, 1288, 1406 |
PaeR7I
| C|TCGAG |
626, 1216 |
PflFI
| GACN|NNGTC |
634 |
PmlI
| CAC|GTG |
347, 358, 529 |
PshAI
| GACNN|NNGTC |
1126 |
PspGI
| |CC[AT]GG |
327 |
PspOMI
| G|GGCCC |
1221 |
PstI
| CTGCA|G |
335 |
PvuI
| CGAT|CG |
1167 |
RsaI
| GT|AC |
307, 921, 1152 |
Sau3AI
| |GATC |
126, 233, 266, 311, 862, 974, 1166 |
Sau96I
| G|GNCC |
837, 1220 |
ScaI
| AGT|ACT |
922 |
ScrFI
| CC|NGG |
280, 327, 859, 1005, 1065, 1304, 1426 |
SfcI
| C|TPuPyAG |
335 |
SmlI
| C|TPyPuAG |
434, 551, 626, 697, 733, 1216 |
SphI
| GCATG|C |
257, 1288 |
StyI
| C|C[AT][AT]GG |
786, 1260 |
Taqƒ¿I
| T|CGA |
124, 194, 249, 625, 939, 1038, 1074, 1088, 1128, 1164, 1196, 1206, 1215, 1382 |
TfiI
| G|A[AT]TC |
24, 190, 197, 284, 390, 429, 668, 719, 809, 1014, 1179, 1516 |
TliI
| C|TCGAG |
626, 1216 |
TseI
| G|C[AT]GC |
81 |
Tsp45I
| |GT[CG]AC |
349, 360 |
Tsp509I
| |AATT |
385, 497, 935, 942, 965 |
TspRI
| NNCA[CG]TGNN| |
339, 1020, 1334 |
Tth111I
| GACN|NNGTC |
634 |
XhoI
| C|TCGAG |
626, 1216 |
XmnI
| GAANN|NNTTC |
215, 485 |
Click here to view TAIR data
>AT1G66350.1 length:1536
ATGAAGAGAG AGCACAACCA CCGTGAATCA TCCGCCGGAG AAGGTGGGAG | 50 |
TTCATCAATG ACGACGGTGA TTAAAGAAGA AGCTGCCGGA GTTGACGAGC | 100 |
TTTTGGTTGT TTTAGGTTAC AAAGTTCGAT CATCCGACAT GGCTGACGTG | 150 |
GCACACAAGC TTGAACAGTT AGAGATGGTT CTTGGTGATG GAATCTCGAA | 200 |
TCTTTCTGAT GAAACTGTTC ATTACAATCC TTCTGATCTC TCTGGTTGGG | 250 |
TCGAAAGCAT GCTCTCGGAT CTTGACCCGA CCCGGATTCA AGAAAAGCCT | 300 |
GACTCAGAGT ACGATCTTAG AGCTATTCCT GGCTCTGCAG TGTATCCACG | 350 |
TGACGAGCAC GTGACTCGTC GGAGCAAGAG GACGAGAATT GAATCGGAGT | 400 |
TATCCTCTAC GCGCTCTGTG GTGGTTTTGG ATTCTCAAGA AACTGGAGTG | 450 |
CGTTTAGTCC ACGCGCTATT AGCTTGTGCT GAAGCTGTTC AACAGAACAA | 500 |
TTTGAAGTTA GCCGACGCGC TCGTGAAGCA CGTGGGGTTA CTCGCGTCCT | 550 |
CTCAAGCTGG TGCTATGAGG AAAGTCGCGA CTTACTTCGC TGAAGGGCTT | 600 |
GCGAGAAGGA TTTACCGTAT TTACCCTCGA GACGATGTCG CGTTGTCTTC | 650 |
GTTTTCGGAC ACTCTTCAGA TTCATTTCTA TGAGTCTTGT CCGTATCTCA | 700 |
AGTTTGCGCA TTTTACGGCG AATCAAGCGA TACTTGAGGT TTTTGCTACG | 750 |
GCGGAGAAGG TTCATGTTAT TGATTTAGGA CTTAACCATG GTTTACAATG | 800 |
GCCGGCTTTG ATTCAAGCTC TTGCTTTACG TCCTAATGGT CCACCGGATT | 850 |
TTCGGTTAAC CGGGATCGGT TATTCGTTAA CCGATATTCA AGAAGTTGGT | 900 |
TGGAAACTTG GTCAGCTTGC GAGTACTATT GGTGTCAATT TCGAATTCAA | 950 |
GAGCATTGCT TTAAACAATT TGTCTGATCT TAAACCGGAA ATGCTAGACA | 1000 |
TTAGACCCGG TTTAGAATCA GTGGCGGTTA ACTCGGTCTT CGAGCTTCAT | 1050 |
CGCCTCTTAG CTCATCCCGG TTCCATCGAT AAGTTTTTAT CGACAATCAA | 1100 |
ATCAATCCGA CCGGATATAA TGACTGTGGT CGAGCAAGAA GCAAACCATA | 1150 |
ACGGTACCGT ATTTCTCGAT CGGTTCACGG AATCGCTACA TTACTATTCG | 1200 |
AGCTTATTCG ACTCGCTCGA GGGCCCGCCA AGCCAAGACC GAGTGATGTC | 1250 |
GGAGTTATTC CTAGGACGGC AGATACTAAA CCTTGTGGCA TGCGAAGGAG | 1300 |
AAGACCGGGT AGAGAGGCAT GAGACTTTAA ATCAGTGGAG AAACCGGTTC | 1350 |
GGTTTAGGAG GATTTAAACC GGTTAGTATC GGTTCGAACG CGTATAAGCA | 1400 |
AGCAAGCATG TTGTTGGCAC TTTATGCCGG GGCTGATGGG TATAATGTGG | 1450 |
AAGAGAATGA AGGTTGTTTG TTGCTTGGAT GGCAAACGCG ACCGCTTATT | 1500 |
GCAACATCTG CGTGGCGAAT CAATCGTGTG GAATAA | 1550 |
>AT1G66350.1 longest ORF length:511
MKREHNHRES SAGEGGSSSM TTVIKEEAAG VDELLVVLGY KVRSSDMADV | 50 |
AHKLEQLEMV LGDGISNLSD ETVHYNPSDL SGWVESMLSD LDPTRIQEKP | 100 |
DSEYDLRAIP GSAVYPRDEH VTRRSKRTRI ESELSSTRSV VVLDSQETGV | 150 |
RLVHALLACA EAVQQNNLKL ADALVKHVGL LASSQAGAMR KVATYFAEGL | 200 |
ARRIYRIYPR DDVALSSFSD TLQIHFYESC PYLKFAHFTA NQAILEVFAT | 250 |
AEKVHVIDLG LNHGLQWPAL IQALALRPNG PPDFRLTGIG YSLTDIQEVG | 300 |
WKLGQLASTI GVNFEFKSIA LNNLSDLKPE MLDIRPGLES VAVNSVFELH | 350 |
RLLAHPGSID KFLSTIKSIR PDIMTVVEQE ANHNGTVFLD RFTESLHYYS | 400 |
SLFDSLEGPP SQDRVMSELF LGRQILNLVA CEGEDRVERH ETLNQWRNRF | 450 |
GLGGFKPVSI GSNAYKQASM LLALYAGADG YNVEENEGCL LLGWQTRPLI | 500 |
ATSAWRINRV E | 550 |
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