fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G66350 RGL1 RGA-like 1 (.1)

>AT1G66350.1 CDS map

>>Show genomic map




Uncut enzymes: AscI, BamHI, BglII, EcoRV, NdeI, NheI, NotI, PacI, PvuII, SacI, SalI, SmaI, SpeI, XbaI
Name Recognition sequence Cut positions
ApaI GGGCC|C 1221
EcoRI G|AATTC 943
HindIII A|AGCTT 157
HpaI GTT|AAC 855, 876, 1027
KpnI GGTAC|C 1153
NcoI C|CATGG 786
PstI CTGCA|G 335
StyI C|C[AT][AT]GG 786, 1260
XhoI C|TCGAG 626, 1216


Click here to view TAIR data

>AT1G66350.1 length:1536
ATGAAGAGAG AGCACAACCA CCGTGAATCA TCCGCCGGAG AAGGTGGGAG 
50
TTCATCAATG ACGACGGTGA TTAAAGAAGA AGCTGCCGGA GTTGACGAGC 
100
TTTTGGTTGT TTTAGGTTAC AAAGTTCGAT CATCCGACAT GGCTGACGTG 
150
GCACACAAGC TTGAACAGTT AGAGATGGTT CTTGGTGATG GAATCTCGAA 
200
TCTTTCTGAT GAAACTGTTC ATTACAATCC TTCTGATCTC TCTGGTTGGG 
250
TCGAAAGCAT GCTCTCGGAT CTTGACCCGA CCCGGATTCA AGAAAAGCCT 
300
GACTCAGAGT ACGATCTTAG AGCTATTCCT GGCTCTGCAG TGTATCCACG 
350
TGACGAGCAC GTGACTCGTC GGAGCAAGAG GACGAGAATT GAATCGGAGT 
400
TATCCTCTAC GCGCTCTGTG GTGGTTTTGG ATTCTCAAGA AACTGGAGTG 
450
CGTTTAGTCC ACGCGCTATT AGCTTGTGCT GAAGCTGTTC AACAGAACAA 
500
TTTGAAGTTA GCCGACGCGC TCGTGAAGCA CGTGGGGTTA CTCGCGTCCT 
550
CTCAAGCTGG TGCTATGAGG AAAGTCGCGA CTTACTTCGC TGAAGGGCTT 
600
GCGAGAAGGA TTTACCGTAT TTACCCTCGA GACGATGTCG CGTTGTCTTC 
650
GTTTTCGGAC ACTCTTCAGA TTCATTTCTA TGAGTCTTGT CCGTATCTCA 
700
AGTTTGCGCA TTTTACGGCG AATCAAGCGA TACTTGAGGT TTTTGCTACG 
750
GCGGAGAAGG TTCATGTTAT TGATTTAGGA CTTAACCATG GTTTACAATG 
800
GCCGGCTTTG ATTCAAGCTC TTGCTTTACG TCCTAATGGT CCACCGGATT 
850
TTCGGTTAAC CGGGATCGGT TATTCGTTAA CCGATATTCA AGAAGTTGGT 
900
TGGAAACTTG GTCAGCTTGC GAGTACTATT GGTGTCAATT TCGAATTCAA 
950
GAGCATTGCT TTAAACAATT TGTCTGATCT TAAACCGGAA ATGCTAGACA 
1000
TTAGACCCGG TTTAGAATCA GTGGCGGTTA ACTCGGTCTT CGAGCTTCAT 
1050
CGCCTCTTAG CTCATCCCGG TTCCATCGAT AAGTTTTTAT CGACAATCAA 
1100
ATCAATCCGA CCGGATATAA TGACTGTGGT CGAGCAAGAA GCAAACCATA 
1150
ACGGTACCGT ATTTCTCGAT CGGTTCACGG AATCGCTACA TTACTATTCG 
1200
AGCTTATTCG ACTCGCTCGA GGGCCCGCCA AGCCAAGACC GAGTGATGTC 
1250
GGAGTTATTC CTAGGACGGC AGATACTAAA CCTTGTGGCA TGCGAAGGAG 
1300
AAGACCGGGT AGAGAGGCAT GAGACTTTAA ATCAGTGGAG AAACCGGTTC 
1350
GGTTTAGGAG GATTTAAACC GGTTAGTATC GGTTCGAACG CGTATAAGCA 
1400
AGCAAGCATG TTGTTGGCAC TTTATGCCGG GGCTGATGGG TATAATGTGG 
1450
AAGAGAATGA AGGTTGTTTG TTGCTTGGAT GGCAAACGCG ACCGCTTATT 
1500
GCAACATCTG CGTGGCGAAT CAATCGTGTG GAATAA
1550

>AT1G66350.1 longest ORF length:511
MKREHNHRES SAGEGGSSSM TTVIKEEAAG VDELLVVLGY KVRSSDMADV 
50
AHKLEQLEMV LGDGISNLSD ETVHYNPSDL SGWVESMLSD LDPTRIQEKP 
100
DSEYDLRAIP GSAVYPRDEH VTRRSKRTRI ESELSSTRSV VVLDSQETGV 
150
RLVHALLACA EAVQQNNLKL ADALVKHVGL LASSQAGAMR KVATYFAEGL 
200
ARRIYRIYPR DDVALSSFSD TLQIHFYESC PYLKFAHFTA NQAILEVFAT 
250
AEKVHVIDLG LNHGLQWPAL IQALALRPNG PPDFRLTGIG YSLTDIQEVG 
300
WKLGQLASTI GVNFEFKSIA LNNLSDLKPE MLDIRPGLES VAVNSVFELH 
350
RLLAHPGSID KFLSTIKSIR PDIMTVVEQE ANHNGTVFLD RFTESLHYYS 
400
SLFDSLEGPP SQDRVMSELF LGRQILNLVA CEGEDRVERH ETLNQWRNRF 
450
GLGGFKPVSI GSNAYKQASM LLALYAGADG YNVEENEGCL LLGWQTRPLI 
500
ATSAWRINRV E
550