fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G66810 AtC3H14 Zinc finger C-x8-C-x5-C-x3-H type family protein (.1)

>AT1G66810.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI
Name Recognition sequence Cut positions
BglII A|GATCT 30, 375, 464, 535, 579
EcoRV GAT|ATC 545
HindIII A|AGCTT 93, 129
NcoI C|CATGG 561
StyI C|C[AT][AT]GG 561
XhoI C|TCGAG 259


Click here to view TAIR data

>AT1G66810.1 length:933
ATGGAGAAAC TCGCGGCGTC TACTGTTACA GATCTAGCTT GCGTAACGGC 
50
GATAAACTCA TCGCCGCCTC CACTATCACC GATCTCTGAA CAAAGCTTCA 
100
ACAACAAACA CCAAGAAGAG TTCGCCGCAA GCTTCGCATC ACTCTACAAC 
150
TCAATCTTCT CACCGGAATC TCTCTCTCCT TCTCCTCCGT CCTCTTCCTC 
200
ACCACCATCT CGCGTCGATA CAACTACAGA GCATCGTCTT CTTCAAGCGA 
250
AACTTATCCT CGAGTACGAC GAACTCAACG AGCATTACGA GCTTTGCCTT 
300
AACCGTCTTC AATCTCTAAT GACGGAACTT GACTCTCTTC GTCACGAAAA 
350
CGATTCTCTC CGCTTTGAAA ACTCAGATCT ACTCAAACTT ATTCGTATCT 
400
CTACTTCATC CTCCTCCTCC GTCTCTCCTC CGGCGCCGAT CCATAACCGT 
450
CAATTCCGTC ACCAGATCTC CGATTCTCGC TCCGCGAAGA GAAACAATCA 
500
AGAGAGAAAC TCGTTGCCTA AGAGCATCTC CGTCAGATCT CAAGGATATC 
550
TCAAGATCAA CCATGGATTT GAAGCGTCAG ATCTCCAAAC GAGTCAACTC 
600
AGCTCTAACT CGGTGTCTTC TTCTCAAAAG GTGTGTGTAG TACAAACAAA 
650
AGGGGAGAGA GAAGCATTAG AGCTTGAGGT ATATCGTCAA GGGATGATGA 
700
AGACGGAGCT TTGTAACAAA TGGCAAGAGA CTGGAGCTTG TTGTTACGGC 
750
GATAATTGCC AATTCGCTCA CGGAATCGAC GAGCTACGTC CTGTGATTAG 
800
GCATCCACGC TACAAAACTG AGGTTTGCAG AATGATGGTC ACCGGAGCTA 
850
TGTGTCCGTA CGGTCACCGT TGCCATTTCC GTCACTCACT TACTGATCAA 
900
GAGAGGATGA TGATGATGAT GCTTACTCGC TGA
950

>AT1G66810.1 longest ORF length:310
MEKLAASTVT DLACVTAINS SPPPLSPISE QSFNNKHQEE FAASFASLYN 
50
SIFSPESLSP SPPSSSSPPS RVDTTTEHRL LQAKLILEYD ELNEHYELCL 
100
NRLQSLMTEL DSLRHENDSL RFENSDLLKL IRISTSSSSS VSPPAPIHNR 
150
QFRHQISDSR SAKRNNQERN SLPKSISVRS QGYLKINHGF EASDLQTSQL 
200
SSNSVSSSQK VCVVQTKGER EALELEVYRQ GMMKTELCNK WQETGACCYG 
250
DNCQFAHGID ELRPVIRHPR YKTEVCRMMV TGAMCPYGHR CHFRHSLTDQ 
300
ERMMMMMLTR 
350