Locus |
Common name |
Short description |
AT1G66810 |
AtC3H14 |
Zinc finger C-x8-C-x5-C-x3-H type family protein (.1) |
>AT1G66810.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, EcoRI, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI
Name |
Recognition sequence |
Cut positions |
BglII
| A|GATCT |
30, 375, 464, 535, 579 |
EcoRV
| GAT|ATC |
545 |
HindIII
| A|AGCTT |
93, 129 |
NcoI
| C|CATGG |
561 |
StyI
| C|C[AT][AT]GG |
561 |
XhoI
| C|TCGAG |
259 |
Click here to view TAIR data
>AT1G66810.1 length:933
ATGGAGAAAC TCGCGGCGTC TACTGTTACA GATCTAGCTT GCGTAACGGC | 50 |
GATAAACTCA TCGCCGCCTC CACTATCACC GATCTCTGAA CAAAGCTTCA | 100 |
ACAACAAACA CCAAGAAGAG TTCGCCGCAA GCTTCGCATC ACTCTACAAC | 150 |
TCAATCTTCT CACCGGAATC TCTCTCTCCT TCTCCTCCGT CCTCTTCCTC | 200 |
ACCACCATCT CGCGTCGATA CAACTACAGA GCATCGTCTT CTTCAAGCGA | 250 |
AACTTATCCT CGAGTACGAC GAACTCAACG AGCATTACGA GCTTTGCCTT | 300 |
AACCGTCTTC AATCTCTAAT GACGGAACTT GACTCTCTTC GTCACGAAAA | 350 |
CGATTCTCTC CGCTTTGAAA ACTCAGATCT ACTCAAACTT ATTCGTATCT | 400 |
CTACTTCATC CTCCTCCTCC GTCTCTCCTC CGGCGCCGAT CCATAACCGT | 450 |
CAATTCCGTC ACCAGATCTC CGATTCTCGC TCCGCGAAGA GAAACAATCA | 500 |
AGAGAGAAAC TCGTTGCCTA AGAGCATCTC CGTCAGATCT CAAGGATATC | 550 |
TCAAGATCAA CCATGGATTT GAAGCGTCAG ATCTCCAAAC GAGTCAACTC | 600 |
AGCTCTAACT CGGTGTCTTC TTCTCAAAAG GTGTGTGTAG TACAAACAAA | 650 |
AGGGGAGAGA GAAGCATTAG AGCTTGAGGT ATATCGTCAA GGGATGATGA | 700 |
AGACGGAGCT TTGTAACAAA TGGCAAGAGA CTGGAGCTTG TTGTTACGGC | 750 |
GATAATTGCC AATTCGCTCA CGGAATCGAC GAGCTACGTC CTGTGATTAG | 800 |
GCATCCACGC TACAAAACTG AGGTTTGCAG AATGATGGTC ACCGGAGCTA | 850 |
TGTGTCCGTA CGGTCACCGT TGCCATTTCC GTCACTCACT TACTGATCAA | 900 |
GAGAGGATGA TGATGATGAT GCTTACTCGC TGA | 950 |
>AT1G66810.1 longest ORF length:310
MEKLAASTVT DLACVTAINS SPPPLSPISE QSFNNKHQEE FAASFASLYN | 50 |
SIFSPESLSP SPPSSSSPPS RVDTTTEHRL LQAKLILEYD ELNEHYELCL | 100 |
NRLQSLMTEL DSLRHENDSL RFENSDLLKL IRISTSSSSS VSPPAPIHNR | 150 |
QFRHQISDSR SAKRNNQERN SLPKSISVRS QGYLKINHGF EASDLQTSQL | 200 |
SSNSVSSSQK VCVVQTKGER EALELEVYRQ GMMKTELCNK WQETGACCYG | 250 |
DNCQFAHGID ELRPVIRHPR YKTEVCRMMV TGAMCPYGHR CHFRHSLTDQ | 300 |
ERMMMMMLTR | 350 |
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