Locus |
Common name |
Short description |
AT1G67260 |
TCP1 |
TCP family transcription factor (.1.2) |
>AT1G67260.2 CDS map
>>Show genomic map

Uncut enzymes: AatII, Acc65I, AccI, AccII(FnuDII), AccIII(BspMII), AciI, AfeI, AflII, AflIII, AgeI, AhdI, AlwI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvrII, BaeI, BamHI, BanI, BbsI, BbvCI, BbvI, BcgI, BciVI, BglII, BlpI, BmrI, BpmI, BsaAI, BsaBI, BsaHI, BsaI, BsaWI, BsaXI, BseRI, BsgI, BsiEI, BsiHKAI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BspEI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrFI, BsrGI, BssHII, BssSI, BstAPI, BstBI, BstEII, BstNI, BstUI, BstXI, BstYI, BstZ17I, BtgI, BtrI, BtsI, Cfr10I, DraI, DraIII, DrdI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HgaI, HhaI, HinP1I, HincII, HindIII, HpaI, HphI, Hpy99I, HpyCH4V, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MslI, MspA1I, N.BstNBI, NaeI, , NarI, NcoI, NgoMIV, NheI, NotI, NruI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspGI, PspOMI, PstI, PvuI, PvuII, RsrII, SacI, SacII, SalI, SapI, SbfI, ScaI, SexAI, SfaNI, SfiI, SfoI, SgrAI, SnaBI, SpeI, SphI, SspI, StuI, StyI, SwaI, TliI, TspRI, Tth111I, XbaI, XcmI, XhoI, XmnI
Name |
Recognition sequence |
Cut positions |
AclI
| AA|CGTT |
387 |
AluI
| AG|CT |
376, 536, 661 |
AlwNI
| CAGNNN|CTG |
155, 719 |
ApoI
| Pu|AATTPy |
966, 1032 |
AvaI
| C|PyCGPuG |
559 |
AvaII
| G|G[AT]CC |
263, 752 |
BalI
| TGG|CCA |
81 |
BanII
| GPuGCPy|C |
555 |
BclI
| T|GATCA |
984 |
BfaI
| C|TAG |
378, 650, 663, 933 |
BglI
| GCCNNNN|NGGC |
597 |
BsaJI
| C|CNNGG |
558 |
BslI
| CCNNNNN|NNGG |
564 |
BsoBI
| C|PyCGPuG |
559 |
Bsp1286I
| G[GAT]GC[CAT]|C |
555 |
BspDI
| AT|CGAT |
169 |
BspHI
| T|CATGA |
999 |
BsrI
| ACTGGN| |
395 |
BssKI
| |CCNGG |
132, 558 |
BstF5I
| GGATGNN| |
520 |
Bsu36I
| CC|TNAGG |
227 |
Cac8I
| GCN|NGC |
334 |
ClaI
| AT|CGAT |
169 |
DdeI
| C|TNAG |
226 |
DpnI
| GA-CH3|TC |
166, 347, 923, 983 |
DpnII
| |GATC |
166, 347, 923, 983 |
EaeI
| Py|GGCCPu |
81 |
Fnu4HI
| GC|NGC |
398, 937 |
HaeIII
| GG|CC |
80, 134, 589, 700 |
HinfI
| G|ANTC |
159, 203, 278, 843, 863 |
HpaII
| C|CGG |
131, 558 |
Hpy188I
| TCN|GA |
164, 726, 741, 926 |
HpyCH4III
| ACN|GT |
565 |
HpyCH4IV
| A|CGT |
386 |
MboI
| |GATC |
166, 347, 923, 983 |
MscI
| TGG|CCA |
81 |
MseI
| T|TAA |
119, 183, 851 |
MspI
| C|CGG |
131, 558 |
MwoI
| GCNNNNN|NNGC |
535, 597 |
NciI
| CC|[CG]GG |
132, 558 |
NdeI
| CA|TATG |
139 |
NlaIII
| CATG| |
175, 748, 998 |
NlaIV
| GGN|NCC |
655, 753, 816 |
RsaI
| GT|AC |
46, 434, 562 |
Sau3AI
| |GATC |
166, 347, 923, 983 |
Sau96I
| G|GNCC |
134, 263, 752 |
ScrFI
| CC|NGG |
132, 558 |
SfcI
| C|TPuPyAG |
770 |
SmaI
| CCC|GGG |
559 |
SmlI
| C|TPyPuAG |
403 |
Taqƒ¿I
| T|CGA |
168, 822 |
TfiI
| G|A[AT]TC |
159, 203, 278, 843 |
TseI
| G|C[AT]GC |
398, 937 |
Tsp45I
| |GT[CG]AC |
1020 |
Tsp509I
| |AATT |
339, 965, 1031 |
XmaI
| C|CCGGG |
559 |
Click here to view TAIR data
>AT1G67260.2 length:1056
ATGTCGTCTT CCACCAATGA CTACAACGAT GGTAATAACA ATGGAGTGTA | 50 |
CCCTCTCTCT CTTTACCTTT CTTCACTCTC TGGCCATCAA GACATCATTC | 100 |
ATAATCCCTA CAACCATCAG TTAAAAGCAT CTCCGGGCCA TATGGTATCA | 150 |
GCAGTTCCTG AATCTCTGAT CGATTACATG GCGTTTAAGT CAAATAATGT | 200 |
TGTGAATCAA CAAGGCTTTG AGTTTCCTGA GGTGTCAAAG GAAATCAAGA | 250 |
AGGTGGTGAA GAAGGACCGA CATAGCAAGA TTCAAACGGC ACAAGGGATT | 300 |
AGAGACAGGA GGGTTAGGCT TTCTATTGGG ATTGCTCGCC AATTCTTTGA | 350 |
TCTTCAGGAT ATGTTGGGGT TTGATAAAGC TAGTAAAACG TTAGACTGGC | 400 |
TGCTCAAGAA GTCAAGAAAA GCCATCAAAG AGGTCGTACA AGCAAAAAAC | 450 |
CTCAACAATG ATGATGAAGA TTTTGGAAAC ATTGGAGGCG ATGTAGAACA | 500 |
AGAAGAGGAG AAGGAGGAGG ATGACAATGG CGATAAGAGC TTCGTGTATG | 550 |
GTTTGAGCCC CGGGTACGGT GAAGAAGAAG TGGTATGTGA GGCCACGAAG | 600 |
GCAGGGATAA GAAAGAAGAA GAGTGAGTTG AGAAACATCT CATCAAAGGG | 650 |
GCTAGGAGCC AAAGCTAGAG GAAAAGCAAA GGAGCGAACA AAAGAGATGA | 700 |
TGGCCTATGA TAATCCAGAG ACTGCCTCTG ATATTACACA ATCTGAAATC | 750 |
ATGGACCCAT TCAAGAGGTC TATAGTCTTC AATGAAGGAG AAGATATGAC | 800 |
ACACCTTTTC TACAAGGAAC CAATCGAGGA GTTTGATAAT CAAGAATCTA | 850 |
TCTTAACCAA TATGACTCTA CCAACGAAGA TGGGTCAAAG TTACAATCAA | 900 |
AATAATGGGA TACTTATGTT GGTAGATCAG AGTTCTAGCA GCAACTATAA | 950 |
TACATTTCTG CCTCAAAATT TGGATTATAG TTATGATCAA AACCCTTTTC | 1000 |
ATGACCAAAC CTTATATGTA GTCACCGACA AAAATTTCCC CAAAGGTTTC | 1050 |
CTATAA | 1100 |
>AT1G67260.2 longest ORF length:351
MSSSTNDYND GNNNGVYPLS LYLSSLSGHQ DIIHNPYNHQ LKASPGHMVS | 50 |
AVPESLIDYM AFKSNNVVNQ QGFEFPEVSK EIKKVVKKDR HSKIQTAQGI | 100 |
RDRRVRLSIG IARQFFDLQD MLGFDKASKT LDWLLKKSRK AIKEVVQAKN | 150 |
LNNDDEDFGN IGGDVEQEEE KEEDDNGDKS FVYGLSPGYG EEEVVCEATK | 200 |
AGIRKKKSEL RNISSKGLGA KARGKAKERT KEMMAYDNPE TASDITQSEI | 250 |
MDPFKRSIVF NEGEDMTHLF YKEPIEEFDN QESILTNMTL PTKMGQSYNQ | 300 |
NNGILMLVDQ SSSSNYNTFL PQNLDYSYDQ NPFHDQTLYV VTDKNFPKGF | 350 |
L | 400 |
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