fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G67970 AT-HSFA8 heat shock transcription factor A8 (.1)

>AT1G67970.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HpaI, KpnI, NcoI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRV GAT|ATC 1008
HindIII A|AGCTT 868
NdeI CA|TATG 380, 692


Click here to view TAIR data

>AT1G67970.1 length:1125
ATGGTGAAAT CGACGGACGG TGGTGGTGGG TCTTCTTCTT CTTCTTCAGT 
50
GGCGCCGTTC TTGAGAAAAT GTTACGATAT GGTTGATGAT TCTACTACTG 
100
ACTCTATAAT CTCATGGAGT CCAAGTGCAG ATAATAGCTT CGTTATCTTG 
150
GACACCACCG TCTTCTCTGT TCAACTCTTG CCTAAATACT TTAAACACAG 
200
CAATTTCTCT AGCTTCATTC GTCAGCTCAA TATCTACGGT TTTAGAAAAG 
250
TTGATGCAGA TCGATGGGAG TTTGCGAATG ACGGGTTTGT GAGAGGTCAA 
300
AAGGATTTGC TGAAGAATGT TATCAGGAGG AAGAATGTTC AAAGTAGTGA 
350
GCAGAGCAAA CATGAGAGTA CAAGTACAAC ATATGCTCAG GAAAAGAGTG 
400
GATTGTGGAA GGAAGTTGAT ATTTTGAAAG GTGATAAGCA GGTATTGGCG 
450
CAGGAGTTGA TCAAAGTTAG GCAGTATCAG GAGGTGACGG ATACTAAGAT 
500
GTTACATTTA GAAGACAGAG TTCAAGGAAT GGAAGAGAGT CAGCAGGAGA 
550
TGCTTTCGTT TTTGGTTATG GTTATGAAGA ATCCAAGTCT TTTAGTTCAG 
600
TTACTTCAGC CAAAGGAGAA AAACACTTGG CGAAAAGCGG GGGAAGGAGC 
650
GAAGATTGTG GAAGAAGTGA CTGATGAAGG AGAATCAAAC TCATATGGTC 
700
TTCCTTTAGT AACATACCAG CCACCATCGG ACAACAATGG AACTGCAAAG 
750
TCAAACTCGA ACGACGTAAA TGATTTCTTG AGAAACGCCG ATATGTTGAA 
800
GTTCTGCTTA GATGAAAACC ATGTGCCATT GATCATACCT GATCTATACG 
850
ATGATGGAGC ATGGGAAAAG CTTTTGTTGT TGAGCCCTTC AAGGAAGAAG 
900
ACGAAGAAGC AGGAGAACAT TGTGAAGAAA GGAAAGGATG ATTTGACATT 
950
GGAGGAGGAG GAGGAGGATG GAACAATGGA ATTAGACAAG AGCTATATGC 
1000
TTAAGCTGAT ATCAGAAGAG ATGGAGAAAC CAGATGACTT TGAATTTGGA 
1050
CAGCTTACTC CTGAGAGGTC TAGGAACCTT GAGATTTTGA CAGAGCAGAT 
1100
GGAATTGCTG GCTTCAAATG AATAG
1150

>AT1G67970.1 longest ORF length:374
MVKSTDGGGG SSSSSSVAPF LRKCYDMVDD STTDSIISWS PSADNSFVIL 
50
DTTVFSVQLL PKYFKHSNFS SFIRQLNIYG FRKVDADRWE FANDGFVRGQ 
100
KDLLKNVIRR KNVQSSEQSK HESTSTTYAQ EKSGLWKEVD ILKGDKQVLA 
150
QELIKVRQYQ EVTDTKMLHL EDRVQGMEES QQEMLSFLVM VMKNPSLLVQ 
200
LLQPKEKNTW RKAGEGAKIV EEVTDEGESN SYGLPLVTYQ PPSDNNGTAK 
250
SNSNDVNDFL RNADMLKFCL DENHVPLIIP DLYDDGAWEK LLLLSPSRKK 
300
TKKQENIVKK GKDDLTLEEE EEDGTMELDK SYMLKLISEE MEKPDDFEFG 
350
QLTPERSRNL EILTEQMELL ASNE
400