Locus |
Common name |
Short description |
AT1G68130 |
IDD14beta, IDD14alpha, ATIDD14 |
indeterminate(ID)-domain 14 (.1), indeterminate(ID)-domain 14 (.2) |
>AT1G68130.1 CDS map
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Uncut enzymes: AatII, Acc65I, AfeI, AflII, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, ApoI, AscI, AseI, AvaI, AvrII, BaeI, BalI, BanI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BglI, BmrI, BpmI, BsaHI, BsaI, BsaXI, BseRI, BsgI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, BspDI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrFI, BsrGI, BsrI, BssHII, BstAPI, BstBI, BstEII, BstF5I, BstXI, BstZ17I, Bsu36I, BtsI, Cfr10I, ClaI, DraI, DraIII, DrdI, EarI, EciI, EcoNI, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HgaI, HincII, HpaI, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MluI, MlyI, MnlI, MscI, NaeI, , NarI, NdeI, NgoMIV, NheI, NotI, NruI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PflMI, PleI, PmeI, PmlI, PshAI, PsiI, PspOMI, PstI, PvuI, PvuII, RsrII, SacI, SalI, SapI, SbfI, ScaI, SexAI, SfaNI, SfiI, SfoI, SgrAI, SmaI, SmlI, SpeI, SphI, SspI, StuI, SwaI, TliI, TspRI, XbaI, XcmI, XhoI, XmaI
Name |
Recognition sequence |
Cut positions |
AccI
| GT|[AC][TG]AC |
331 |
AccII(FnuDII)
| CG|CG |
376, 515, 670, 979 |
AccIII(BspMII)
| T|CCGGA |
153, 342 |
AciI
| C|CGC |
105, 135, 660, 669 |
AclI
| AA|CGTT |
186 |
AflIII
| A|CPuPyGT |
352, 1205 |
AluI
| AG|CT |
288, 490, 807, 813, 908, 1027, 1032, 1042, 1129, 1199 |
AvaII
| G|G[AT]CC |
242, 692, 705 |
BamHI
| G|GATCC |
150 |
BfaI
| C|TAG |
191, 932 |
BglII
| A|GATCT |
218, 387 |
BlpI
| GC|TNAGC |
1031 |
BsaAI
| PyAC|GTPu |
208 |
BsaBI
| GATNN|NNATC |
976 |
BsaJI
| C|CNNGG |
228, 283, 671 |
BsaWI
| [AT]|CCGG[AT] |
147, 153, 342 |
BsiEI
| CGPuPy|CG |
537 |
BsiHKAI
| G[AT]GC[AT]|C |
571, 1182 |
BsiWI
| C|GTACG |
591 |
BslI
| CCNNNNN|NNGG |
752 |
Bsp1286I
| G[GAT]GC[CAT]|C |
571, 1182 |
BspEI
| T|CCGGA |
153, 342 |
BsrDI
| GCAATGNN| |
440 |
BssKI
| |CCNGG |
139, 717 |
BssSI
| C|TCGTG |
391 |
BstNI
| CC|[AT]GG |
717 |
BstUI
| CG|CG |
376, 515, 670, 979 |
BstYI
| Pu|GATCPy |
150, 218, 387, 443 |
BtgI
| C|CPuPyGG |
283, 671 |
BtrI
| CAC|GTC |
1185 |
Cac8I
| GCN|NGC |
449, 1115 |
DdeI
| C|TNAG |
115, 852, 1030, 1159 |
DpnI
| GA-CH3|TC |
80, 149, 200, 217, 386, 442, 597, 875, 970 |
DpnII
| |GATC |
80, 149, 200, 217, 386, 442, 597, 875, 970 |
EaeI
| Py|GGCCPu |
519, 537, 1193 |
EagI
| C|GGCCG |
537 |
EcoO109I
| PuG|GNCCPy |
693 |
Fnu4HI
| GC|NGC |
517, 535, 629, 1137 |
HaeIII
| GG|CC |
518, 536, 1192 |
HhaI
| GCG|C |
377 |
HinP1I
| G|CGC |
377 |
HindIII
| A|AGCTT |
289 |
HinfI
| G|ANTC |
113, 195, 248, 328, 397 |
HpaII
| C|CGG |
138, 146, 152, 341, 1133 |
Hpy188I
| TCN|GA |
78, 116, 198, 382, 412, 480, 753, 891, 1160 |
Hpy99I
| CG[AT]CG| |
92, 414, 751 |
HpyCH4III
| ACN|GT |
94, 588, 616, 749 |
HpyCH4IV
| A|CGT |
185, 207, 333, 1184 |
HpyCH4V
| TG|CA |
258, 584, 1081, 1092, 1112 |
MboI
| |GATC |
80, 149, 200, 217, 386, 442, 597, 875, 970 |
MfeI
| C|AATTG |
1110 |
MseI
| T|TAA |
294 |
MslI
| CAPyNN|NNPuTG |
527 |
MspA1I
| C[AC]G|C[GT]G |
671 |
MspI
| C|CGG |
138, 146, 152, 341, 1133 |
MwoI
| GCNNNNN|NNGC |
454, 517, 592, 669, 1111, 1137 |
N.BstNBI
| GAGTCNNNN|N |
333 |
NciI
| CC|[CG]GG |
139 |
NcoI
| C|CATGG |
283 |
NlaIII
| CATG| |
282, 351, 623, 1019, 1204 |
NlaIV
| GGN|NCC |
103, 150, 242, 345, 692, 1146 |
NsiI
| ATGCA|T |
259 |
NspI
| PuCATG|Py |
352, 1020, 1205 |
PciI
| A|CATGT |
352, 1205 |
PflFI
| GACN|NNGTC |
888 |
PpuMI
| PuG|G[AT]CCPy |
693 |
PspGI
| |CC[AT]GG |
717 |
RsaI
| GT|AC |
205, 590, 1170 |
SacII
| CCGC|GG |
671 |
Sau3AI
| |GATC |
80, 149, 200, 217, 386, 442, 597, 875, 970 |
Sau96I
| G|GNCC |
242, 692, 705 |
ScrFI
| CC|NGG |
139, 717 |
SfcI
| C|TPuPyAG |
253, 863 |
SnaBI
| TAC|GTA |
208 |
StyI
| C|C[AT][AT]GG |
228, 283 |
Taqƒ¿I
| T|CGA |
804, 824, 972 |
TfiI
| G|A[AT]TC |
195, 248, 397 |
TseI
| G|C[AT]GC |
629, 1137 |
Tsp45I
| |GT[CG]AC |
111, 529 |
Tsp509I
| |AATT |
830, 984, 1109 |
Tth111I
| GACN|NNGTC |
888 |
XmnI
| GAANN|NNTTC |
409 |
Click here to view TAIR data
>AT1G68130.1 length:1260
ATGATAGACT ACGAGAGAAG CAATACCACC AAGAACATCA ACACCCATCA | 50 |
TCACAACCCT CCTCCATCTT CATCTTCCTC TGATCTTCTT CCCGACGGTA | 100 |
ATGGAACCGC CGTGACTCAG AAGCGGAAAC GGAGACCCGC CGGGACACCG | 150 |
GATCCGGAGG CGGAGGTGGT ATCTTTATCA CCAAGAACGT TACTAGAATC | 200 |
GGATCGGTAC GTATGTGAGA TCTGTAACCA AGGGTTTCAA AGGGACCAGA | 250 |
ATCTACAGAT GCATAGAAGA CGACATAAAG TTCCATGGAA GCTTCTTAAA | 300 |
AGAGAGACCA ACGAGGAAGT GAGGAAAAGA GTCTACGTCT GTCCGGAGCC | 350 |
GACATGTCTC CACCACAACC CTTGCCACGC GCTCGGAGAT CTCGTGGGAA | 400 |
TCAAGAAACA CTTCCGACGG AAACATAGTA ACCACAAGCA ATGGATCTGC | 450 |
GAGCGATGCT CAAAAGGCTA CGCAGTTCAA TCTGATTACA AAGCTCATCT | 500 |
CAAAACCTGT GGCACTCGCG GCCACTCCTG TGACTGCGGC CGAGTTTTTT | 550 |
CCAGAGTGGA AAGTTTCATA GAGCACCAAG ACACTTGCAC CGTACGCCGA | 600 |
TCCCAACCCT CCAACCACCG TTTACATGAG CAGCAACAAC ATACCACAAA | 650 |
CGCTACACAA ACCGCTTCAA CCGCGGAAAA CAACGAGAAC GGGGACCTCT | 700 |
CCATTGGTCC TATATTGCCT GGACATCCTT TACAAAGAAG ACAATCCCCA | 750 |
CCGTCGGAAC AACAACCATC CACTTTGCTC TATCCCTTCG TTACTAATGG | 800 |
TAGTATCGAG CTTCAGCTAC TTCCATCGAG GAATTGTGCT GATGAGACCA | 850 |
GCCTTAGTCT GTCTATAGGG ACAATGGATC AAAAGACAAT GTCGGAAGTT | 900 |
GAGAAGAAGA GCTACGAGAA GGGAGAAACG AGCCTAGAAA GAGAGGAGGC | 950 |
GAGAAGAGAA ACAAAGAGGC AGATCGAAAT CGCGGAATTG GAGTTTGCTG | 1000 |
AAGCCAAGAG AATAAGGCAA CATGCGAGAG CTGAGCTTCA CAAAGCTCAT | 1050 |
CTTTTTAGAG AAGAAGCAAG TAGGAGGATT AGTGCAACGA TGATGCAAAT | 1100 |
AACTTGCCAC AATTGCAAGC AACATTTTCA AGCTCCGGCT GCTTTGGTTC | 1150 |
CTCCTCCTCC TCAGACGCAT TGTACCGATG AGAGCACGTC TCTGGCCGTG | 1200 |
AGCTACATGT CTTCGGCGAC TACCGAAGGA GAAAAGGCGA GTGATAGAGC | 1250 |
ATCTTCATAG | 1300 |
>AT1G68130.1 longest ORF length:419
MIDYERSNTT KNINTHHHNP PPSSSSSDLL PDGNGTAVTQ KRKRRPAGTP | 50 |
DPEAEVVSLS PRTLLESDRY VCEICNQGFQ RDQNLQMHRR RHKVPWKLLK | 100 |
RETNEEVRKR VYVCPEPTCL HHNPCHALGD LVGIKKHFRR KHSNHKQWIC | 150 |
ERCSKGYAVQ SDYKAHLKTC GTRGHSCDCG RVFSRVESFI EHQDTCTVRR | 200 |
SQPSNHRLHE QQQHTTNATQ TASTAENNEN GDLSIGPILP GHPLQRRQSP | 250 |
PSEQQPSTLL YPFVTNGSIE LQLLPSRNCA DETSLSLSIG TMDQKTMSEV | 300 |
EKKSYEKGET SLEREEARRE TKRQIEIAEL EFAEAKRIRQ HARAELHKAH | 350 |
LFREEASRRI SATMMQITCH NCKQHFQAPA ALVPPPPQTH CTDESTSLAV | 400 |
SYMSSATTEG EKASDRASS | 450 |
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