fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G68130 IDD14beta, IDD14alpha, ATIDD14 indeterminate(ID)-domain 14 (.1), indeterminate(ID)-domain 14 (.2)

>AT1G68130.2 CDS map

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Uncut enzymes: AatII, Acc65I, AclI, AfeI, AflII, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, ApoI, AscI, AseI, AvaI, AvrII, BaeI, BalI, BamHI, BanI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BglI, BmrI, BpmI, BsaAI, BsaHI, BsaI, BsaXI, BseRI, BsgI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, BspDI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrFI, BsrGI, BsrI, BssHII, BstAPI, BstBI, BstEII, BstF5I, BstXI, BstZ17I, Bsu36I, BtsI, Cfr10I, ClaI, DraI, DraIII, DrdI, EarI, EciI, EcoNI, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HgaI, HincII, HpaI, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MluI, MlyI, MnlI, MscI, NaeI, , NarI, NciI, NdeI, NgoMIV, NheI, NotI, NruI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PflMI, PleI, PmeI, PmlI, PshAI, PsiI, PspOMI, PstI, PvuI, PvuII, RsrII, SacI, SalI, SapI, SbfI, ScaI, SexAI, SfaNI, SfiI, SfoI, SgrAI, SmaI, SmlI, SnaBI, SpeI, SphI, SspI, StuI, SwaI, TliI, TspRI, XbaI, XcmI, XhoI, XmaI
Name Recognition sequence Cut positions
AccI GT|[AC][TG]AC 73
AccII(FnuDII) CG|CG 118, 257, 412, 721
AccIII(BspMII) T|CCGGA 84
AciI C|CGC 402, 411
AflIII A|CPuPyGT 94, 947
AluI AG|CT 30, 232, 549, 555, 650, 769, 774, 784, 871, 941
AvaII G|G[AT]CC 434, 447
BfaI C|TAG 674
BglII A|GATCT 129
BlpI GC|TNAGC 773
BsaBI GATNN|NNATC 718
BsaJI C|CNNGG 25, 413
BsaWI [AT]|CCGG[AT] 84
BsiEI CGPuPy|CG 279
BsiHKAI G[AT]GC[AT]|C 313, 924
BsiWI C|GTACG 333
BslI CCNNNNN|NNGG 494
Bsp1286I G[GAT]GC[CAT]|C 313, 924
BspEI T|CCGGA 84
BsrDI GCAATGNN| 182
BssKI |CCNGG 459
BssSI C|TCGTG 133
BstNI CC|[AT]GG 459
BstUI CG|CG 118, 257, 412, 721
BstYI Pu|GATCPy 129, 185
BtgI C|CPuPyGG 25, 413
BtrI CAC|GTC 927
Cac8I GCN|NGC 191, 857
DdeI C|TNAG 594, 772, 901
DpnI GA-CH3|TC 128, 184, 339, 617, 712
DpnII |GATC 128, 184, 339, 617, 712
EaeI Py|GGCCPu 261, 279, 935
EagI C|GGCCG 279
EcoO109I PuG|GNCCPy 435
Fnu4HI GC|NGC 259, 277, 371, 879
HaeIII GG|CC 260, 278, 934
HhaI GCG|C 119
HinP1I G|CGC 119
HindIII A|AGCTT 31
HinfI G|ANTC 70, 139
HpaII C|CGG 83, 875
Hpy188I TCN|GA 124, 154, 222, 495, 633, 902
Hpy99I CG[AT]CG| 156, 493
HpyCH4III ACN|GT 330, 358, 491
HpyCH4IV A|CGT 75, 926
HpyCH4V TG|CA 0, 326, 823, 834, 854
MboI |GATC 128, 184, 339, 617, 712
MfeI C|AATTG 852
MseI T|TAA 36
MslI CAPyNN|NNPuTG 269
MspA1I C[AC]G|C[GT]G 413
MspI C|CGG 83, 875
MwoI GCNNNNN|NNGC 196, 259, 334, 411, 853, 879
N.BstNBI GAGTCNNNN|N 75
NcoI C|CATGG 25
NlaIII CATG| 24, 93, 365, 761, 946
NlaIV GGN|NCC 87, 434, 888
NsiI ATGCA|T 1
NspI PuCATG|Py 94, 762, 947
PciI A|CATGT 94, 947
PflFI GACN|NNGTC 630
PpuMI PuG|G[AT]CCPy 435
PspGI |CC[AT]GG 459
RsaI GT|AC 332, 912
SacII CCGC|GG 413
Sau3AI |GATC 128, 184, 339, 617, 712
Sau96I G|GNCC 434, 447
ScrFI CC|NGG 459
SfcI C|TPuPyAG 605
StyI C|C[AT][AT]GG 25
Taqƒ¿I T|CGA 546, 566, 714
TfiI G|A[AT]TC 139
TseI G|C[AT]GC 371, 879
Tsp45I |GT[CG]AC 271
Tsp509I |AATT 572, 726, 851
Tth111I GACN|NNGTC 630
XmnI GAANN|NNTTC 151


Click here to view TAIR data

>AT1G68130.2 length:1002
ATGCATAGAA GACGACATAA AGTTCCATGG AAGCTTCTTA AAAGAGAGAC 
50
CAACGAGGAA GTGAGGAAAA GAGTCTACGT CTGTCCGGAG CCGACATGTC 
100
TCCACCACAA CCCTTGCCAC GCGCTCGGAG ATCTCGTGGG AATCAAGAAA 
150
CACTTCCGAC GGAAACATAG TAACCACAAG CAATGGATCT GCGAGCGATG 
200
CTCAAAAGGC TACGCAGTTC AATCTGATTA CAAAGCTCAT CTCAAAACCT 
250
GTGGCACTCG CGGCCACTCC TGTGACTGCG GCCGAGTTTT TTCCAGAGTG 
300
GAAAGTTTCA TAGAGCACCA AGACACTTGC ACCGTACGCC GATCCCAACC 
350
CTCCAACCAC CGTTTACATG AGCAGCAACA ACATACCACA AACGCTACAC 
400
AAACCGCTTC AACCGCGGAA AACAACGAGA ACGGGGACCT CTCCATTGGT 
450
CCTATATTGC CTGGACATCC TTTACAAAGA AGACAATCCC CACCGTCGGA 
500
ACAACAACCA TCCACTTTGC TCTATCCCTT CGTTACTAAT GGTAGTATCG 
550
AGCTTCAGCT ACTTCCATCG AGGAATTGTG CTGATGAGAC CAGCCTTAGT 
600
CTGTCTATAG GGACAATGGA TCAAAAGACA ATGTCGGAAG TTGAGAAGAA 
650
GAGCTACGAG AAGGGAGAAA CGAGCCTAGA AAGAGAGGAG GCGAGAAGAG 
700
AAACAAAGAG GCAGATCGAA ATCGCGGAAT TGGAGTTTGC TGAAGCCAAG 
750
AGAATAAGGC AACATGCGAG AGCTGAGCTT CACAAAGCTC ATCTTTTTAG 
800
AGAAGAAGCA AGTAGGAGGA TTAGTGCAAC GATGATGCAA ATAACTTGCC 
850
ACAATTGCAA GCAACATTTT CAAGCTCCGG CTGCTTTGGT TCCTCCTCCT 
900
CCTCAGACGC ATTGTACCGA TGAGAGCACG TCTCTGGCCG TGAGCTACAT 
950
GTCTTCGGCG ACTACCGAAG GAGAAAAGGC GAGTGATAGA GCATCTTCAT 
1000
AG
1050

>AT1G68130.2 longest ORF length:333
MHRRRHKVPW KLLKRETNEE VRKRVYVCPE PTCLHHNPCH ALGDLVGIKK 
50
HFRRKHSNHK QWICERCSKG YAVQSDYKAH LKTCGTRGHS CDCGRVFSRV 
100
ESFIEHQDTC TVRRSQPSNH RLHEQQQHTT NATQTASTAE NNENGDLSIG 
150
PILPGHPLQR RQSPPSEQQP STLLYPFVTN GSIELQLLPS RNCADETSLS 
200
LSIGTMDQKT MSEVEKKSYE KGETSLEREE ARRETKRQIE IAELEFAEAK 
250
RIRQHARAEL HKAHLFREEA SRRISATMMQ ITCHNCKQHF QAPAALVPPP 
300
PQTHCTDEST SLAVSYMSSA TTEGEKASDR ASS
350