Locus |
Common name |
Short description |
AT1G68130 |
IDD14beta, IDD14alpha, ATIDD14 |
indeterminate(ID)-domain 14 (.1), indeterminate(ID)-domain 14 (.2) |
>AT1G68130.2 CDS map
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Uncut enzymes: AatII, Acc65I, AclI, AfeI, AflII, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, ApoI, AscI, AseI, AvaI, AvrII, BaeI, BalI, BamHI, BanI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BglI, BmrI, BpmI, BsaAI, BsaHI, BsaI, BsaXI, BseRI, BsgI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, BspDI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrFI, BsrGI, BsrI, BssHII, BstAPI, BstBI, BstEII, BstF5I, BstXI, BstZ17I, Bsu36I, BtsI, Cfr10I, ClaI, DraI, DraIII, DrdI, EarI, EciI, EcoNI, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HgaI, HincII, HpaI, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MluI, MlyI, MnlI, MscI, NaeI, , NarI, NciI, NdeI, NgoMIV, NheI, NotI, NruI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PflMI, PleI, PmeI, PmlI, PshAI, PsiI, PspOMI, PstI, PvuI, PvuII, RsrII, SacI, SalI, SapI, SbfI, ScaI, SexAI, SfaNI, SfiI, SfoI, SgrAI, SmaI, SmlI, SnaBI, SpeI, SphI, SspI, StuI, SwaI, TliI, TspRI, XbaI, XcmI, XhoI, XmaI
Name |
Recognition sequence |
Cut positions |
AccI
| GT|[AC][TG]AC |
73 |
AccII(FnuDII)
| CG|CG |
118, 257, 412, 721 |
AccIII(BspMII)
| T|CCGGA |
84 |
AciI
| C|CGC |
402, 411 |
AflIII
| A|CPuPyGT |
94, 947 |
AluI
| AG|CT |
30, 232, 549, 555, 650, 769, 774, 784, 871, 941 |
AvaII
| G|G[AT]CC |
434, 447 |
BfaI
| C|TAG |
674 |
BglII
| A|GATCT |
129 |
BlpI
| GC|TNAGC |
773 |
BsaBI
| GATNN|NNATC |
718 |
BsaJI
| C|CNNGG |
25, 413 |
BsaWI
| [AT]|CCGG[AT] |
84 |
BsiEI
| CGPuPy|CG |
279 |
BsiHKAI
| G[AT]GC[AT]|C |
313, 924 |
BsiWI
| C|GTACG |
333 |
BslI
| CCNNNNN|NNGG |
494 |
Bsp1286I
| G[GAT]GC[CAT]|C |
313, 924 |
BspEI
| T|CCGGA |
84 |
BsrDI
| GCAATGNN| |
182 |
BssKI
| |CCNGG |
459 |
BssSI
| C|TCGTG |
133 |
BstNI
| CC|[AT]GG |
459 |
BstUI
| CG|CG |
118, 257, 412, 721 |
BstYI
| Pu|GATCPy |
129, 185 |
BtgI
| C|CPuPyGG |
25, 413 |
BtrI
| CAC|GTC |
927 |
Cac8I
| GCN|NGC |
191, 857 |
DdeI
| C|TNAG |
594, 772, 901 |
DpnI
| GA-CH3|TC |
128, 184, 339, 617, 712 |
DpnII
| |GATC |
128, 184, 339, 617, 712 |
EaeI
| Py|GGCCPu |
261, 279, 935 |
EagI
| C|GGCCG |
279 |
EcoO109I
| PuG|GNCCPy |
435 |
Fnu4HI
| GC|NGC |
259, 277, 371, 879 |
HaeIII
| GG|CC |
260, 278, 934 |
HhaI
| GCG|C |
119 |
HinP1I
| G|CGC |
119 |
HindIII
| A|AGCTT |
31 |
HinfI
| G|ANTC |
70, 139 |
HpaII
| C|CGG |
83, 875 |
Hpy188I
| TCN|GA |
124, 154, 222, 495, 633, 902 |
Hpy99I
| CG[AT]CG| |
156, 493 |
HpyCH4III
| ACN|GT |
330, 358, 491 |
HpyCH4IV
| A|CGT |
75, 926 |
HpyCH4V
| TG|CA |
0, 326, 823, 834, 854 |
MboI
| |GATC |
128, 184, 339, 617, 712 |
MfeI
| C|AATTG |
852 |
MseI
| T|TAA |
36 |
MslI
| CAPyNN|NNPuTG |
269 |
MspA1I
| C[AC]G|C[GT]G |
413 |
MspI
| C|CGG |
83, 875 |
MwoI
| GCNNNNN|NNGC |
196, 259, 334, 411, 853, 879 |
N.BstNBI
| GAGTCNNNN|N |
75 |
NcoI
| C|CATGG |
25 |
NlaIII
| CATG| |
24, 93, 365, 761, 946 |
NlaIV
| GGN|NCC |
87, 434, 888 |
NsiI
| ATGCA|T |
1 |
NspI
| PuCATG|Py |
94, 762, 947 |
PciI
| A|CATGT |
94, 947 |
PflFI
| GACN|NNGTC |
630 |
PpuMI
| PuG|G[AT]CCPy |
435 |
PspGI
| |CC[AT]GG |
459 |
RsaI
| GT|AC |
332, 912 |
SacII
| CCGC|GG |
413 |
Sau3AI
| |GATC |
128, 184, 339, 617, 712 |
Sau96I
| G|GNCC |
434, 447 |
ScrFI
| CC|NGG |
459 |
SfcI
| C|TPuPyAG |
605 |
StyI
| C|C[AT][AT]GG |
25 |
Taqƒ¿I
| T|CGA |
546, 566, 714 |
TfiI
| G|A[AT]TC |
139 |
TseI
| G|C[AT]GC |
371, 879 |
Tsp45I
| |GT[CG]AC |
271 |
Tsp509I
| |AATT |
572, 726, 851 |
Tth111I
| GACN|NNGTC |
630 |
XmnI
| GAANN|NNTTC |
151 |
Click here to view TAIR data
>AT1G68130.2 length:1002
ATGCATAGAA GACGACATAA AGTTCCATGG AAGCTTCTTA AAAGAGAGAC | 50 |
CAACGAGGAA GTGAGGAAAA GAGTCTACGT CTGTCCGGAG CCGACATGTC | 100 |
TCCACCACAA CCCTTGCCAC GCGCTCGGAG ATCTCGTGGG AATCAAGAAA | 150 |
CACTTCCGAC GGAAACATAG TAACCACAAG CAATGGATCT GCGAGCGATG | 200 |
CTCAAAAGGC TACGCAGTTC AATCTGATTA CAAAGCTCAT CTCAAAACCT | 250 |
GTGGCACTCG CGGCCACTCC TGTGACTGCG GCCGAGTTTT TTCCAGAGTG | 300 |
GAAAGTTTCA TAGAGCACCA AGACACTTGC ACCGTACGCC GATCCCAACC | 350 |
CTCCAACCAC CGTTTACATG AGCAGCAACA ACATACCACA AACGCTACAC | 400 |
AAACCGCTTC AACCGCGGAA AACAACGAGA ACGGGGACCT CTCCATTGGT | 450 |
CCTATATTGC CTGGACATCC TTTACAAAGA AGACAATCCC CACCGTCGGA | 500 |
ACAACAACCA TCCACTTTGC TCTATCCCTT CGTTACTAAT GGTAGTATCG | 550 |
AGCTTCAGCT ACTTCCATCG AGGAATTGTG CTGATGAGAC CAGCCTTAGT | 600 |
CTGTCTATAG GGACAATGGA TCAAAAGACA ATGTCGGAAG TTGAGAAGAA | 650 |
GAGCTACGAG AAGGGAGAAA CGAGCCTAGA AAGAGAGGAG GCGAGAAGAG | 700 |
AAACAAAGAG GCAGATCGAA ATCGCGGAAT TGGAGTTTGC TGAAGCCAAG | 750 |
AGAATAAGGC AACATGCGAG AGCTGAGCTT CACAAAGCTC ATCTTTTTAG | 800 |
AGAAGAAGCA AGTAGGAGGA TTAGTGCAAC GATGATGCAA ATAACTTGCC | 850 |
ACAATTGCAA GCAACATTTT CAAGCTCCGG CTGCTTTGGT TCCTCCTCCT | 900 |
CCTCAGACGC ATTGTACCGA TGAGAGCACG TCTCTGGCCG TGAGCTACAT | 950 |
GTCTTCGGCG ACTACCGAAG GAGAAAAGGC GAGTGATAGA GCATCTTCAT | 1000 |
AG | 1050 |
>AT1G68130.2 longest ORF length:333
MHRRRHKVPW KLLKRETNEE VRKRVYVCPE PTCLHHNPCH ALGDLVGIKK | 50 |
HFRRKHSNHK QWICERCSKG YAVQSDYKAH LKTCGTRGHS CDCGRVFSRV | 100 |
ESFIEHQDTC TVRRSQPSNH RLHEQQQHTT NATQTASTAE NNENGDLSIG | 150 |
PILPGHPLQR RQSPPSEQQP STLLYPFVTN GSIELQLLPS RNCADETSLS | 200 |
LSIGTMDQKT MSEVEKKSYE KGETSLEREE ARRETKRQIE IAELEFAEAK | 250 |
RIRQHARAEL HKAHLFREEA SRRISATMMQ ITCHNCKQHF QAPAALVPPP | 300 |
PQTHCTDEST SLAVSYMSSA TTEGEKASDR ASS | 350 |
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