|
|
|
|
|
|
|
|
| Locus | Common name | Short description |
| AT1G68130 | IDD14beta, IDD14alpha, ATIDD14 | indeterminate(ID)-domain 14 (.1), indeterminate(ID)-domain 14 (.2) |
>AT1G68130.2 CDS map
>>Show genomic map
Uncut enzymes: AatII, Acc65I, AclI, AfeI, AflII, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, ApoI, AscI, AseI, AvaI, AvrII, BaeI, BalI, BamHI, BanI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BglI, BmrI, BpmI, BsaAI, BsaHI, BsaI, BsaXI, BseRI, BsgI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, BspDI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrFI, BsrGI, BsrI, BssHII, BstAPI, BstBI, BstEII, BstF5I, BstXI, BstZ17I, Bsu36I, BtsI, Cfr10I, ClaI, DraI, DraIII, DrdI, EarI, EciI, EcoNI, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HgaI, HincII, HpaI, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MluI, MlyI, MnlI, MscI, NaeI, , NarI, NciI, NdeI, NgoMIV, NheI, NotI, NruI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PflMI, PleI, PmeI, PmlI, PshAI, PsiI, PspOMI, PstI, PvuI, PvuII, RsrII, SacI, SalI, SapI, SbfI, ScaI, SexAI, SfaNI, SfiI, SfoI, SgrAI, SmaI, SmlI, SnaBI, SpeI, SphI, SspI, StuI, SwaI, TliI, TspRI, XbaI, XcmI, XhoI, XmaI
| Name | Recognition sequence | Cut positions |
| AccI | GT|[AC][TG]AC | 73 |
| AccII(FnuDII) | CG|CG | 118, 257, 412, 721 |
| AccIII(BspMII) | T|CCGGA | 84 |
| AciI | C|CGC | 402, 411 |
| AflIII | A|CPuPyGT | 94, 947 |
| AluI | AG|CT | 30, 232, 549, 555, 650, 769, 774, 784, 871, 941 |
| AvaII | G|G[AT]CC | 434, 447 |
| BfaI | C|TAG | 674 |
| BglII | A|GATCT | 129 |
| BlpI | GC|TNAGC | 773 |
| BsaBI | GATNN|NNATC | 718 |
| BsaJI | C|CNNGG | 25, 413 |
| BsaWI | [AT]|CCGG[AT] | 84 |
| BsiEI | CGPuPy|CG | 279 |
| BsiHKAI | G[AT]GC[AT]|C | 313, 924 |
| BsiWI | C|GTACG | 333 |
| BslI | CCNNNNN|NNGG | 494 |
| Bsp1286I | G[GAT]GC[CAT]|C | 313, 924 |
| BspEI | T|CCGGA | 84 |
| BsrDI | GCAATGNN| | 182 |
| BssKI | |CCNGG | 459 |
| BssSI | C|TCGTG | 133 |
| BstNI | CC|[AT]GG | 459 |
| BstUI | CG|CG | 118, 257, 412, 721 |
| BstYI | Pu|GATCPy | 129, 185 |
| BtgI | C|CPuPyGG | 25, 413 |
| BtrI | CAC|GTC | 927 |
| Cac8I | GCN|NGC | 191, 857 |
| DdeI | C|TNAG | 594, 772, 901 |
| DpnI | GA-CH3|TC | 128, 184, 339, 617, 712 |
| DpnII | |GATC | 128, 184, 339, 617, 712 |
| EaeI | Py|GGCCPu | 261, 279, 935 |
| EagI | C|GGCCG | 279 |
| EcoO109I | PuG|GNCCPy | 435 |
| Fnu4HI | GC|NGC | 259, 277, 371, 879 |
| HaeIII | GG|CC | 260, 278, 934 |
| HhaI | GCG|C | 119 |
| HinP1I | G|CGC | 119 |
| HindIII | A|AGCTT | 31 |
| HinfI | G|ANTC | 70, 139 |
| HpaII | C|CGG | 83, 875 |
| Hpy188I | TCN|GA | 124, 154, 222, 495, 633, 902 |
| Hpy99I | CG[AT]CG| | 156, 493 |
| HpyCH4III | ACN|GT | 330, 358, 491 |
| HpyCH4IV | A|CGT | 75, 926 |
| HpyCH4V | TG|CA | 0, 326, 823, 834, 854 |
| MboI | |GATC | 128, 184, 339, 617, 712 |
| MfeI | C|AATTG | 852 |
| MseI | T|TAA | 36 |
| MslI | CAPyNN|NNPuTG | 269 |
| MspA1I | C[AC]G|C[GT]G | 413 |
| MspI | C|CGG | 83, 875 |
| MwoI | GCNNNNN|NNGC | 196, 259, 334, 411, 853, 879 |
| N.BstNBI | GAGTCNNNN|N | 75 |
| NcoI | C|CATGG | 25 |
| NlaIII | CATG| | 24, 93, 365, 761, 946 |
| NlaIV | GGN|NCC | 87, 434, 888 |
| NsiI | ATGCA|T | 1 |
| NspI | PuCATG|Py | 94, 762, 947 |
| PciI | A|CATGT | 94, 947 |
| PflFI | GACN|NNGTC | 630 |
| PpuMI | PuG|G[AT]CCPy | 435 |
| PspGI | |CC[AT]GG | 459 |
| RsaI | GT|AC | 332, 912 |
| SacII | CCGC|GG | 413 |
| Sau3AI | |GATC | 128, 184, 339, 617, 712 |
| Sau96I | G|GNCC | 434, 447 |
| ScrFI | CC|NGG | 459 |
| SfcI | C|TPuPyAG | 605 |
| StyI | C|C[AT][AT]GG | 25 |
| Taqƒ¿I | T|CGA | 546, 566, 714 |
| TfiI | G|A[AT]TC | 139 |
| TseI | G|C[AT]GC | 371, 879 |
| Tsp45I | |GT[CG]AC | 271 |
| Tsp509I | |AATT | 572, 726, 851 |
| Tth111I | GACN|NNGTC | 630 |
| XmnI | GAANN|NNTTC | 151 |
Click here to view TAIR data
>AT1G68130.2 length:1002
ATGCATAGAA GACGACATAA AGTTCCATGG AAGCTTCTTA AAAGAGAGAC | 50 |
CAACGAGGAA GTGAGGAAAA GAGTCTACGT CTGTCCGGAG CCGACATGTC | 100 |
TCCACCACAA CCCTTGCCAC GCGCTCGGAG ATCTCGTGGG AATCAAGAAA | 150 |
CACTTCCGAC GGAAACATAG TAACCACAAG CAATGGATCT GCGAGCGATG | 200 |
CTCAAAAGGC TACGCAGTTC AATCTGATTA CAAAGCTCAT CTCAAAACCT | 250 |
GTGGCACTCG CGGCCACTCC TGTGACTGCG GCCGAGTTTT TTCCAGAGTG | 300 |
GAAAGTTTCA TAGAGCACCA AGACACTTGC ACCGTACGCC GATCCCAACC | 350 |
CTCCAACCAC CGTTTACATG AGCAGCAACA ACATACCACA AACGCTACAC | 400 |
AAACCGCTTC AACCGCGGAA AACAACGAGA ACGGGGACCT CTCCATTGGT | 450 |
CCTATATTGC CTGGACATCC TTTACAAAGA AGACAATCCC CACCGTCGGA | 500 |
ACAACAACCA TCCACTTTGC TCTATCCCTT CGTTACTAAT GGTAGTATCG | 550 |
AGCTTCAGCT ACTTCCATCG AGGAATTGTG CTGATGAGAC CAGCCTTAGT | 600 |
CTGTCTATAG GGACAATGGA TCAAAAGACA ATGTCGGAAG TTGAGAAGAA | 650 |
GAGCTACGAG AAGGGAGAAA CGAGCCTAGA AAGAGAGGAG GCGAGAAGAG | 700 |
AAACAAAGAG GCAGATCGAA ATCGCGGAAT TGGAGTTTGC TGAAGCCAAG | 750 |
AGAATAAGGC AACATGCGAG AGCTGAGCTT CACAAAGCTC ATCTTTTTAG | 800 |
AGAAGAAGCA AGTAGGAGGA TTAGTGCAAC GATGATGCAA ATAACTTGCC | 850 |
ACAATTGCAA GCAACATTTT CAAGCTCCGG CTGCTTTGGT TCCTCCTCCT | 900 |
CCTCAGACGC ATTGTACCGA TGAGAGCACG TCTCTGGCCG TGAGCTACAT | 950 |
GTCTTCGGCG ACTACCGAAG GAGAAAAGGC GAGTGATAGA GCATCTTCAT | 1000 |
AG | 1050 |
>AT1G68130.2 longest ORF length:333
MHRRRHKVPW KLLKRETNEE VRKRVYVCPE PTCLHHNPCH ALGDLVGIKK | 50 |
HFRRKHSNHK QWICERCSKG YAVQSDYKAH LKTCGTRGHS CDCGRVFSRV | 100 |
ESFIEHQDTC TVRRSQPSNH RLHEQQQHTT NATQTASTAE NNENGDLSIG | 150 |
PILPGHPLQR RQSPPSEQQP STLLYPFVTN GSIELQLLPS RNCADETSLS | 200 |
LSIGTMDQKT MSEVEKKSYE KGETSLEREE ARRETKRQIE IAELEFAEAK | 250 |
RIRQHARAEL HKAHLFREEA SRRISATMMQ ITCHNCKQHF QAPAALVPPP | 300 |
PQTHCTDEST SLAVSYMSSA TTEGEKASDR ASS | 350 |