fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G68150 ATWRKY9, WRKY9 WRKY DNA-binding protein 9 (.1)

>AT1G68150.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI
Name Recognition sequence Cut positions
BglII A|GATCT 493
HindIII A|AGCTT 337, 1050
NcoI C|CATGG 899
SacI GAGCT|C 277
StyI C|C[AT][AT]GG 429, 899
XbaI T|CTAGA 534, 1072
XhoI C|TCGAG 103, 761


Click here to view TAIR data

>AT1G68150.1 length:1125
ATGGGATTTG ACTTTAGCAC TTCAAAATCC AAAGCTAAAA GACAAAAAAG 
50
AATAGAGGTT CGATTTGCAT CTCCATTAAT GGGCATCGAT CTTTCTCTTA 
100
AGCTCGAGGC CGAGGAGAAA AAGAAAGAGA TAGAAGGATC GAAACATAGC 
150
CGTGAGAACA AAGAAGACGA AGAACATGAT GCTAGTGGTG ATGAAGATGA 
200
ACAAATGGTG AAAGAAGACG AAGATGATTC TTCTTCTTTA GGTTTAAGAA 
250
CCCGAGAAGA AGAAAACGAA CGTGAAGAGC TCTTGCAGCT ACAGATCCAG 
300
ATGGAAAGTG TGAAAGAAGA GAATACTAGG TTGAGGAAGC TTGTCGAGCA 
350
GACTCTTGAA GATTATCGTC ATCTTGAGAT GAAATTCCCG GTTATCGATA 
400
AAACCAAGAA GATGGATCTT GAAATGTTCC TTGGAGTACA AGGCAAACGA 
450
TGTGTGGATA TAACAAGTAA GGCTCGGAAA AGAGGAGCTG AGAGATCTCC 
500
GTCAATGGAA AGAGAAATAG GGCTTTCACT TTCTCTAGAG AAAAAACAGA 
550
AACAAGAAGA GAGCAAAGAA GCTGTTCAGT CTCATCACCA AAGATACAAT 
600
AGTAGCAGCT TAGATATGAA TATGCCACGT ATCATTTCAT CTTCTCAAGG 
650
TAATAGAAAG GCCAGGGTGT CCGTGAGGGC GAGATGTGAG ACCGCAACAA 
700
TGAATGATGG ATGCCAATGG AGGAAGTACG GTCAGAAAAC CGCGAAAGGG 
750
AATCCATGTC CTCGAGCTTA TTACCGATGC ACCGTGGCTC CAGGATGTCC 
800
CGTTAGAAAA CAGGTGCAAA GGTGTTTAGA AGACATGTCA ATACTGATAA 
850
CAACCTACGA AGGAACACAT AACCATCCAC TTCCGGTCGG AGCAACAGCC 
900
ATGGCTTCCA CTGCCTCTAC TTCTCCATTC TTGTTACTCG ATTCCAGTGA 
950
CAACCTCTCT CATCCTTCCT ATTACCAAAC TCCTCAAGCC ATAGACTCTT 
1000
CTTTGATTAC ATACCCACAA AATAGCAGCT ACAACAATCG AACCATAAGA 
1050
AGCTTGAACT TTGATGGTCC ATCTAGAGGA GATCACGTTT CATCTTCTCA 
1100
AAACCGATTA AATTGGATGA TGTAG
1150

>AT1G68150.1 longest ORF length:374
MGFDFSTSKS KAKRQKRIEV RFASPLMGID LSLKLEAEEK KKEIEGSKHS 
50
RENKEDEEHD ASGDEDEQMV KEDEDDSSSL GLRTREEENE REELLQLQIQ 
100
MESVKEENTR LRKLVEQTLE DYRHLEMKFP VIDKTKKMDL EMFLGVQGKR 
150
CVDITSKARK RGAERSPSME REIGLSLSLE KKQKQEESKE AVQSHHQRYN 
200
SSSLDMNMPR IISSSQGNRK ARVSVRARCE TATMNDGCQW RKYGQKTAKG 
250
NPCPRAYYRC TVAPGCPVRK QVQRCLEDMS ILITTYEGTH NHPLPVGATA 
300
MASTASTSPF LLLDSSDNLS HPSYYQTPQA IDSSLITYPQ NSSYNNRTIR 
350
SLNFDGPSRG DHVSSSQNRL NWMM
400