fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G68200 Zinc finger C-x8-C-x5-C-x3-H type family protein (.1.2)

>AT1G68200.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NheI, NotI, PacI, PstI, PvuII, SmaI, SpeI, StyI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 271, 472
NdeI CA|TATG 713
SacI GAGCT|C 253
SalI G|TCGAC 105
XbaI T|CTAGA 207


Click here to view TAIR data

>AT1G68200.1 length:927
ATGGAAAACA AAATCGCGCC GTTTAGTTAC AGCGGAAGCT CCGCCGGAAA 
50
TTCATCCAGT GGCGGCGTCG TTTCGTCGTC TCTCTACTCT GATCAACTCT 
100
ACAAGTCGAC TCGCAACATA ATGCAACAGC GTCAAGATAT GGTGAATCGC 
150
GAGGCGTTGT GTTACACGCG TCTCCATGAG GCTTCGCTTG AAGCAGAAGC 
200
GCTTCGTCTA GAGAACACTG AACTCCGATC GATGAATCTT CGTCTCAAGA 
250
ATGAGCTCAA CAGTCTCATC AGATCTTCGA TCCAGAACCG ATTTGATCAT 
300
CGATCTCCGC TTCGGATGCT TAGCAATCTT TCGATCGGAG GTAATGACGC 
350
CGACGAAGTG GAGAATCAGA ACCGTACGGT TAATCGCGAT GACGTCAATG 
400
ATAAGAGTCC GACGAGTGTT ATGGAGAATG AGGATCTGAA TCGCTCTTCG 
450
CTTCCAAAGA GCATCTCTGT GAGATCTAAT GGCTACTCTA AGGCAAGTCA 
500
GGGAGGTGGT GGTGCGGCTG CTCAAAGTGG AAAACCTCGT GGAACCGTCA 
550
CTAAGCCTGG GACTTGTGGT CAAGTCAGTA CTACGCAGAA GGTGTATGTG 
600
CGAGGAGGAG GGAAGAAAGA AGATCAGGAG GAAGAGATAG AAGTGGAGGT 
650
GTACAATCAA GGGATGACAA AGACAGAGCT GTGCAACAAA TGGCAAGAGA 
700
CAGGGACATG CCCATATGGT GACCATTGCC AGTTCGCTCA CGGCATTAAG 
750
GAACTCCGTC CAGTGATCCG CCATCCCCGT TACAAGACTG AGGTTTGCAG 
800
AATGGTTCTT GCTGGTGATA ACTGTCCTTA TGGTCACCGT TGCCACTTCC 
850
GCCACTCACT ATCTGAGCAG GAGAAGCTCG TTGCTGCTGG TTTCAAACCC 
900
AAGTCATCCC TCAAGCTGAT CACATGA
950

>AT1G68200.1 longest ORF length:308
MENKIAPFSY SGSSAGNSSS GGVVSSSLYS DQLYKSTRNI MQQRQDMVNR 
50
EALCYTRLHE ASLEAEALRL ENTELRSMNL RLKNELNSLI RSSIQNRFDH 
100
RSPLRMLSNL SIGGNDADEV ENQNRTVNRD DVNDKSPTSV MENEDLNRSS 
150
LPKSISVRSN GYSKASQGGG GAAAQSGKPR GTVTKPGTCG QVSTTQKVYV 
200
RGGGKKEDQE EEIEVEVYNQ GMTKTELCNK WQETGTCPYG DHCQFAHGIK 
250
ELRPVIRHPR YKTEVCRMVL AGDNCPYGHR CHFRHSLSEQ EKLVAAGFKP 
300
KSSLKLIT
350