fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G68200 Zinc finger C-x8-C-x5-C-x3-H type family protein (.1.2)

>AT1G68200.2 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NheI, NotI, PacI, PstI, PvuII, SmaI, SpeI, StyI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 271, 472
NdeI CA|TATG 710
SacI GAGCT|C 253
SalI G|TCGAC 105
XbaI T|CTAGA 207


Click here to view TAIR data

>AT1G68200.2 length:924
ATGGAAAACA AAATCGCGCC GTTTAGTTAC AGCGGAAGCT CCGCCGGAAA 
50
TTCATCCAGT GGCGGCGTCG TTTCGTCGTC TCTCTACTCT GATCAACTCT 
100
ACAAGTCGAC TCGCAACATA ATGCAACAGC GTCAAGATAT GGTGAATCGC 
150
GAGGCGTTGT GTTACACGCG TCTCCATGAG GCTTCGCTTG AAGCAGAAGC 
200
GCTTCGTCTA GAGAACACTG AACTCCGATC GATGAATCTT CGTCTCAAGA 
250
ATGAGCTCAA CAGTCTCATC AGATCTTCGA TCCAGAACCG ATTTGATCAT 
300
CGATCTCCGC TTCGGATGCT TAGCAATCTT TCGATCGGAG GTAATGACGC 
350
CGACGAAGTG GAGAATCAGA ACCGTACGGT TAATCGCGAT GACGTCAATG 
400
ATAAGAGTCC GACGAGTGTT ATGGAGAATG AGGATCTGAA TCGCTCTTCG 
450
CTTCCAAAGA GCATCTCTGT GAGATCTAAT GGCTACTCTA AGGCAAGTCA 
500
GGGAGGTGGT GGTGCGGCTG CTCAAAGTGG AAAACCTCGT GGAACCGTCA 
550
CTAAGCCTGG GACTTGTGGT CAAGTCAGTA CTACGAAGGT GTATGTGCGA 
600
GGAGGAGGGA AGAAAGAAGA TCAGGAGGAA GAGATAGAAG TGGAGGTGTA 
650
CAATCAAGGG ATGACAAAGA CAGAGCTGTG CAACAAATGG CAAGAGACAG 
700
GGACATGCCC ATATGGTGAC CATTGCCAGT TCGCTCACGG CATTAAGGAA 
750
CTCCGTCCAG TGATCCGCCA TCCCCGTTAC AAGACTGAGG TTTGCAGAAT 
800
GGTTCTTGCT GGTGATAACT GTCCTTATGG TCACCGTTGC CACTTCCGCC 
850
ACTCACTATC TGAGCAGGAG AAGCTCGTTG CTGCTGGTTT CAAACCCAAG 
900
TCATCCCTCA AGCTGATCAC ATGA
950

>AT1G68200.2 longest ORF length:307
MENKIAPFSY SGSSAGNSSS GGVVSSSLYS DQLYKSTRNI MQQRQDMVNR 
50
EALCYTRLHE ASLEAEALRL ENTELRSMNL RLKNELNSLI RSSIQNRFDH 
100
RSPLRMLSNL SIGGNDADEV ENQNRTVNRD DVNDKSPTSV MENEDLNRSS 
150
LPKSISVRSN GYSKASQGGG GAAAQSGKPR GTVTKPGTCG QVSTTKVYVR 
200
GGGKKEDQEE EIEVEVYNQG MTKTELCNKW QETGTCPYGD HCQFAHGIKE 
250
LRPVIRHPRY KTEVCRMVLA GDNCPYGHRC HFRHSLSEQE KLVAAGFKPK 
300
SSLKLIT
350