fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G68210 APRR6 pseudo-response regulator 6 (.1)

>AT1G68210.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, KpnI, NcoI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 1596
BglII A|GATCT 300, 1080, 2052
EcoRI G|AATTC 966
EcoRV GAT|ATC 1570
HindIII A|AGCTT 467, 506
HpaI GTT|AAC 1135
NdeI CA|TATG 1585, 1744
XbaI T|CTAGA 330, 1866


Click here to view TAIR data

>AT1G68210.1 length:2268
ATGGCTGGAT GCTTAGTTCC TGAATGTGCT GATGATATTT CCATCCTGCT 
50
AATCGACCAT GACACTGCAT CAATCGCGTC TCTCACATCA ATGCTTCAAC 
100
AATTTTCAAA AAGAGTGATG AGCGTGGATG TGGCAAGTAA GGCTCTATCG 
150
ATGATTGAGA AGCAGAAGAA GGAAATTGGA CTCATCATAG CTAACATTGA 
200
AATGCCTCAC ATAGACTCAC ATTCGTTCCT CAATGCTTTG CTTCTCAAAG 
250
ATATTCCTCT CATATTGATT AATCCAGAGA TAAAGACAAA AGAACCATCA 
300
GATCTTTTGA CAAAAAGAGC GTGCTTTTCT CTAGATAAAC CAATTTCAAA 
350
TGACGACATC AAAAACATGT GGCAACACGT CTTCTCTAAA AAGAGTCAAG 
400
AGTTAAAGAA AATCAACATA ACTGAAGATC AAGAGAATGT CATGGATAAA 
450
GATACATATC AGATTGAAGC TTTCCGAGCA AACCTTAAGA GACAGAGAAT 
500
AAGTCAAGCT TCTTTGTTAG GAAGACGACC ATTCATCGAC ACATTTTCAA 
550
CTTATGAAAC ATTCCAAAAG AGAAAAAGTA TTGCAAATGT TGAATGGAAA 
600
ACTACACCAA GTTATGCTAT TGAGATTGAG AATAAGAGAA AGGAATGGAA 
650
GAAAAGTGTT GGAAGACGTA AGAGTTTGTG GAATAGTGAG CGTCACATGA 
700
AGTTTATAGC TGCTATCTCC ATTTTGGGTG AAGAAGATTT TCGTCCAAAA 
750
TCCATATTAG AGATTATGAA TGACCCAAAC TTAACTCATC GTCAAGTCGG 
800
TAGCCACCTT CAGAAATACA AGGCTCAAAT TGACCAAATA AGCTATACAT 
850
TGCCAAGAAA TGAATCGAGA TCGATAGATA AAACATTCGA ATATCCTTCG 
900
AACTACAAAT ATCCTTTCAA AATATCAGAC TTAACAAATA ATCTCATTGT 
950
AAGTAATTCC TTGTGGAATT CTTTAGAAAA GAAAAACTCT GCATCAGCCT 
1000
CTATCACTCA ATTTTTGTTT AAAAAACCTA TTGGTGAGAA AGAGGAAACA 
1050
ATGCCAAAGT TTCATATAGG CGGGAAATTA GATCTAAGCA ATCATTCAGT 
1100
TCATGGTAAC GTCCTTAACA AGCTATCTAT GAATGTTAAC TTCGTTCCTT 
1150
CAACCATAAG TAATAATCCA GCTTACAATA TTCTTTCTAT CGATAGCTCT 
1200
AGTATCGATA GCTCTAGCTA TACTGGTTTA GTTTCAACTG GCTTAAGTAG 
1250
TGAAAATTCT CCTATCCTTT ATGGTTTACC ATCGAATGAT GGTGCATCTA 
1300
ACACATGCAC ATCTCAGATG GAATCCGAAA GGATTTCTAT TCCGCAGTAT 
1350
GATCCTAATC AATGTCACCC ACATAGATCC ATCCTTGAAA CTGATGTAAA 
1400
CCAAATAGAT TTAGATTTTA CTTCTATACT AGATTCTTTC GATCCTCTAG 
1450
TAGATGAGTG CCTTATGAAG GAAAACAATA GATTTCTTCC AAACCCTACC 
1500
ATGAACCTTT TGGATACCGA TATAGACAAG ATGGATTGGG TTTCATTTAT 
1550
AGAAAACCTT AGTCACCATG ATATCAATAT GAACCATATG GATTGGGATC 
1600
CTTCAACAGC AAATTACGTT CTTCCTGAAA CCAACATGAA CATAAATTTT 
1650
CCTGAAAAAC ATACAAACGA GATAGGTTGG GTTTCTTCAC AAGTAGGTTA 
1700
TGTTCCTTTT GAAAATATGA TTCCCTCTGA AGTAGATATA AACCATATGG 
1750
GCATGGGTTA TTCTGGAGGA AGTATTCCCC CTCAAGAAGA AACTAATACA 
1800
AATAATGTGG GCTTTGTTTC TTGTGAAATA CATAGTGAAA TCCCTCCCAA 
1850
AACTAATATG GCCATTCTAG AAACCAATTA TTCAAATCCG TTAGATTGGG 
1900
TTTTCCCTGA AGATATAACT TCACTCGAAA CCAATACCAT CCAAAAGAGT 
1950
TTGGTTTCTT GTGAAACAAG TTACGATGCT TTGGATAATA TGGTTCCTTT 
2000
GGAAACCAAT ATGGAAGAGA TGAACGATGC TCTTTACGAT ATTTCGATTG 
2050
AAGATCTGAT TTCTTTTGAC ATTGATGCCA ATGAGAAGGA TATATTCTCT 
2100
TGGTTAGAAG ACAATGGTTT TTCTGAGGAA AATAATATGA TGGAGTCATG 
2150
CGAATATCAT AATATAGAAT CTGTGAATCA AAGTGATGAT ATGAAGATAG 
2200
ACGATAACTT TGATGATTAT CGTGAATGCA TGGATTGGAT TAACGAAGAG 
2250
ATGAATAAAG ATGTATGA
2300

>AT1G68210.1 longest ORF length:755
MAGCLVPECA DDISILLIDH DTASIASLTS MLQQFSKRVM SVDVASKALS 
50
MIEKQKKEIG LIIANIEMPH IDSHSFLNAL LLKDIPLILI NPEIKTKEPS 
100
DLLTKRACFS LDKPISNDDI KNMWQHVFSK KSQELKKINI TEDQENVMDK 
150
DTYQIEAFRA NLKRQRISQA SLLGRRPFID TFSTYETFQK RKSIANVEWK 
200
TTPSYAIEIE NKRKEWKKSV GRRKSLWNSE RHMKFIAAIS ILGEEDFRPK 
250
SILEIMNDPN LTHRQVGSHL QKYKAQIDQI SYTLPRNESR SIDKTFEYPS 
300
NYKYPFKISD LTNNLIVSNS LWNSLEKKNS ASASITQFLF KKPIGEKEET 
350
MPKFHIGGKL DLSNHSVHGN VLNKLSMNVN FVPSTISNNP AYNILSIDSS 
400
SIDSSSYTGL VSTGLSSENS PILYGLPSND GASNTCTSQM ESERISIPQY 
450
DPNQCHPHRS ILETDVNQID LDFTSILDSF DPLVDECLMK ENNRFLPNPT 
500
MNLLDTDIDK MDWVSFIENL SHHDINMNHM DWDPSTANYV LPETNMNINF 
550
PEKHTNEIGW VSSQVGYVPF ENMIPSEVDI NHMGMGYSGG SIPPQEETNT 
600
NNVGFVSCEI HSEIPPKTNM AILETNYSNP LDWVFPEDIT SLETNTIQKS 
650
LVSCETSYDA LDNMVPLETN MEEMNDALYD ISIEDLISFD IDANEKDIFS 
700
WLEDNGFSEE NNMMESCEYH NIESVNQSDD MKIDDNFDDY RECMDWINEE 
750
MNKDV
800