fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G68240 bHLH109 basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1), basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.2)

>AT1G68240.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
HindIII A|AGCTT 316
NcoI C|CATGG 203
StyI C|C[AT][AT]GG 203, 445


Click here to view TAIR data

>AT1G68240.1 length:558
ATGGAGAGAA ACAACCGCAA CGAGGGGACT CACGAAGAAG AGCAATGTTC 
50
GCTTTCTGAT ATTATTTATT CGTTTTGTTC AGAAAATCAT AGTGAATTAA 
100
ACCCTTTGCA AGAGATATTC GGTGTTACCA AAAACAATGA TCATGAGAAA 
150
CACGACGAGG AGCCAGACGA GGAAAGTTAC CGTATGGCTA AACGGCAACG 
200
TTCCATGGAA TATCGTATGA TGATGGAGAA GAAAAGACGA AAGGAGATCA 
250
AAGATAAAGT AGATATTTTG CAGGGGTTGA TGCCTAATCA TTGCACAAAG 
300
CCGGACCTTG CATCGAAGCT TGAAAACATC ATTGAATACA TTAAAAGTTT 
350
GAAATATCAA GTAGATGTTA TGTCAATGGC ATACACAACA ACTCCGGTTT 
400
ACACACCACC ATTTTATGCA GCAGCTCAAG CACCATGTAT GTCTCCTTGG 
450
GGCTATTATA CGCCAGGAGT TCCAATGATG CCTCAGCAAA ACATGACCTA 
500
TATCCCGCAA TATCCTCAGG TATATGGAAC AGTGCCGCCA AATCAAACTC 
550
AACCTTAA
600

>AT1G68240.1 longest ORF length:185
MERNNRNEGT HEEEQCSLSD IIYSFCSENH SELNPLQEIF GVTKNNDHEK 
50
HDEEPDEESY RMAKRQRSME YRMMMEKKRR KEIKDKVDIL QGLMPNHCTK 
100
PDLASKLENI IEYIKSLKYQ VDVMSMAYTT TPVYTPPFYA AAQAPCMSPW 
150
GYYTPGVPMM PQQNMTYIPQ YPQVYGTVPP NQTQP
200