fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G68550 CRF10 cytokinin response factor 10, Integrase-type DNA-binding superfamily protein (.1.2)

>AT1G68550.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 882
HindIII A|AGCTT 449, 466
NheI G|CTAGC 891
StyI C|C[AT][AT]GG 190, 325


Click here to view TAIR data

>AT1G68550.1 length:975
ATGGTTGCGA TTAGAAAGGA ACAGTCTTTG AGTGGTGTTA GTAGCGAGAT 
50
TAAGAAGAGA GCTAAGAGAA ACACTCTATC GTCCCTTCCT CAAGAAACCC 
100
AACCTTTGAG GAAAGTCCGT ATTATTGTGA ATGATCCTTA TGCTACTGAT 
150
GATTCCTCTA GTGATGAGGA AGAGCTTAAG GTTCCTAAGC CAAGGAAAAT 
200
GAAACGTATC GTTCGTGAGA TTAACTTTCC TTCTATGGAA GTTTCTGAAC 
250
AGCCTTCTGA GAGTTCTTCT CAGGACAGTA CTAAAACTGA TGGCAAGATA 
300
GCTGTGTCAG CTTCTCCTGC TGTTCCTAGG AAGAAGCCTG TTGGTGTTAG 
350
GCAAAGGAAA TGGGGGAAAT GGGCTGCTGA GATTAGAGAT CCTATTAAGA 
400
AAACTAGGAC TTGGTTGGGT ACTTTTGATA CTCTTGAAGA AGCTGCTAAA 
450
GCTTATGATG CTAAGAAGCT TGAGTTTGAT GCTATTGTTG CTGGAAATGT 
500
GTCCACTACT AAACGTGATG TTTCTTCATC TGAGACTAGC CAATGCTCTC 
550
GTTCTTCACC TGTTGTTCCT GTTGAGCAAG ATGACACTTC TGCATCAGCT 
600
CTCACTTGTG TCAACAACCC TGATGACGTC TCGACCGTTG CTCCAACTGC 
650
TCCAACTCCA AATGTTCCTG CTGGTGGAAA CAAGGAAACG TTGTTCGATT 
700
TCGACTTTAC TAATCTACAG ATCCCTGATT TTGGTTTCTT GGCAGAGGAG 
750
CAACAAGACC TAGACTTCGA TTGTTTCCTC GCGGATGATC AGTTTGATGA 
800
TTTCGGCTTG CTTGATGACA TTCAAGGATT CGAAGATAAC GGTCCAAGTG 
850
CGTTACCAGA TTTCGACTTT GCGGATGTTG AAGATCTTCA GCTAGCTGAC 
900
TCTAGTTTCG GTTTCCTTGA TCAACTTGCT CCTATCAACA TCTCTTGCCC 
950
ATTAAAAAGT TTTGCAGCTT CATAG
1000

>AT1G68550.1 longest ORF length:324
MVAIRKEQSL SGVSSEIKKR AKRNTLSSLP QETQPLRKVR IIVNDPYATD 
50
DSSSDEEELK VPKPRKMKRI VREINFPSME VSEQPSESSS QDSTKTDGKI 
100
AVSASPAVPR KKPVGVRQRK WGKWAAEIRD PIKKTRTWLG TFDTLEEAAK 
150
AYDAKKLEFD AIVAGNVSTT KRDVSSSETS QCSRSSPVVP VEQDDTSASA 
200
LTCVNNPDDV STVAPTAPTP NVPAGGNKET LFDFDFTNLQ IPDFGFLAEE 
250
QQDLDFDCFL ADDQFDDFGL LDDIQGFEDN GPSALPDFDF ADVEDLQLAD 
300
SSFGFLDQLA PINISCPLKS FAAS
350