fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G68800 TCP12, BRC2, TCP18 BRANCHED 2, TCP domain protein 12 (.1)

>AT1G68800.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SmaI, SpeI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 353
HindIII A|AGCTT 253
SacI GAGCT|C 630
SalI G|TCGAC 972
StyI C|C[AT][AT]GG 235, 979
XbaI T|CTAGA 12


Click here to view TAIR data

>AT1G68800.1 length:1071
ATGTTTCCTT CTCTAGATAC CAATGGCTAT GACCTCTTTG ATCCCTTCAT 
50
TCCCCATCAA ACAACCATGT TTCCTTCTTT CATTACTCAC ATTCAAAGCC 
100
CTAATTCTCA CCATCACTAC TCTTCGCCTT CTTTTCCTTT CTCTTCCGAT 
150
TTTCTTGAGA GTTTTGATGA ATCCTTCTTG ATAAACCAAT TCTTGTTACA 
200
GCAGCAAGAT GTAGCAGCAA ATGTTGTTGA ATCTCCTTGG AAATTTTGCA 
250
AGAAGCTTGA GCTTAAGAAG AAGAATGAGA AGTGTGTTGA TGGAAGCACC 
300
TCACAAGAGG TTCAATGGAG AAGGACGGTC AAAAAAAGGG ACAGGCATAG 
350
TAAGATCTGC ACGGCTCAAG GTCCTAGAGA CCGGAGGATG AGGCTGTCTC 
400
TTCAGATTGC TCGCAAGTTT TTCGATCTTC AAGACATGTT GGGTTTCGAC 
450
AAGGCGAGCA AGACGATTGA ATGGCTTTTC TCCAAATCAA AGACTTCCAT 
500
CAAACAACTT AAAGAAAGAG TGGCTGCATC GGAAGGAGGA GGAAAGGATG 
550
AACATCTCCA GGTTGATGAA AAGGAAAAGG ATGAGACACT GAAGTTGAGA 
600
GTCTCAAAGA GAAGAACAAA GACTATGGAG AGCTCTTTTA AGACTAAAGA 
650
GTCGAGAGAG AGAGCTAGAA AGCGAGCAAG AGAGAGAACA ATGGCAAAGA 
700
TGAAGATGAG ATTATTTGAG ACCTCGGAAA CAATTTCAGA TCCTCATCAA 
750
GAAACTAGAG AGATCAAGAT AACCAATGGT GTACAATTAC TAGAAAAGGA 
800
AAATAAAGAA CAAGAATGGA GTAATACTAA TGATGTTCAC ATGGTAGAGT 
850
ATCAAATGGA TTCTGTGAGC ATCATAGAGA AGTTTCTTGG ACTAACCAGT 
900
GACTCTAGCT CCTCTTCCAT TTTTGGTGAC TCCGAGGAAT GTTACACAAG 
950
TCTTAGTTCA GTAAGAGGAA TGTCGACACC AAGGGAACAC AACACAACTT 
1000
CAATAGCAAC GGTGGATGAG GAGAAAAGCC CCATATCATC TTTCTCTCTA 
1050
TATGATTATC TCTGCTACTG A
1100

>AT1G68800.1 longest ORF length:356
MFPSLDTNGY DLFDPFIPHQ TTMFPSFITH IQSPNSHHHY SSPSFPFSSD 
50
FLESFDESFL INQFLLQQQD VAANVVESPW KFCKKLELKK KNEKCVDGST 
100
SQEVQWRRTV KKRDRHSKIC TAQGPRDRRM RLSLQIARKF FDLQDMLGFD 
150
KASKTIEWLF SKSKTSIKQL KERVAASEGG GKDEHLQVDE KEKDETLKLR 
200
VSKRRTKTME SSFKTKESRE RARKRARERT MAKMKMRLFE TSETISDPHQ 
250
ETREIKITNG VQLLEKENKE QEWSNTNDVH MVEYQMDSVS IIEKFLGLTS 
300
DSSSSSIFGD SEECYTSLSS VRGMSTPREH NTTSIATVDE EKSPISSFSL 
350
YDYLCY
400