Locus |
Common name |
Short description |
AT1G68840 |
EDF2, RAV2, RAP2.8, TEM2, AtRAV2 |
TEMPRANILLO 2, RELATED TO AP2 8, ETHYLENE RESPONSE DNA BINDING FACTOR 2, related to ABI3/VP1 2 (.1.2) |
>AT1G68840.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, EcoRI, HindIII, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SmaI, SpeI, XbaI
Name |
Recognition sequence |
Cut positions |
BamHI
| G|GATCC |
141 |
BglII
| A|GATCT |
236, 988 |
EcoRV
| GAT|ATC |
928 |
HpaI
| GTT|AAC |
700 |
SacI
| GAGCT|C |
230 |
SalI
| G|TCGAC |
415, 487 |
StyI
| C|C[AT][AT]GG |
764 |
XhoI
| C|TCGAG |
992 |
Click here to view TAIR data
>AT1G68840.1 length:1059
ATGGATTCTA GTTGCATAGA CGAGATAAGT TCCTCCACTT CAGAATCTTT | 50 |
CTCCGCCACC ACCGCCAAGA AGCTCTCTCC TCCTCCCGCG GCGGCGTTAC | 100 |
GCCTCTACCG GATGGGAAGC GGCGGGAGCA GCGTCGTGTT GGATCCCGAG | 150 |
AACGGCCTAG AGACGGAGTC ACGAAAGCTA CCATCTTCAA AATACAAAGG | 200 |
TGTTGTTCCT CAGCCTAACG GAAGATGGGG AGCTCAGATC TACGAGAAGC | 250 |
ACCAACGAGT ATGGCTCGGG ACTTTCAACG AGCAAGAAGA AGCTGCTCGT | 300 |
TCCTACGACA TCGCAGCTTG TAGATTCCGT GGCCGCGACG CCGTCGTCAA | 350 |
CTTCAAGAAC GTTCTGGAAG ACGGCGATTT AGCTTTTCTT GAAGCTCACT | 400 |
CAAAGGCCGA GATCGTCGAC ATGTTGAGAA AACACACTTA CGCCGACGAG | 450 |
CTTGAACAGA ACAATAAACG GCAGTTGTTT CTCTCCGTCG ACGCTAACGG | 500 |
AAAACGTAAC GGATCGAGTA CTACTCAAAA CGACAAAGTT TTAAAGACGC | 550 |
GTGAAGTTCT TTTCGAGAAG GCTGTTACAC CTAGCGACGT TGGGAAGCTA | 600 |
AACCGTCTCG TGATACCTAA ACAACACGCC GAGAAACACT TTCCGTTACC | 650 |
GTCACCGTCA CCGGCAGTGA CTAAAGGAGT TTTGATCAAC TTCGAAGACG | 700 |
TTAACGGTAA AGTGTGGAGG TTCCGTTACT CATACTGGAA CAGTAGTCAA | 750 |
AGTTACGTGT TGACCAAGGG ATGGAGTCGA TTCGTCAAGG AGAAGAATCT | 800 |
TCGAGCCGGT GATGTTGTTA CTTTCGAGAG ATCGACCGGA CTAGAGCGGC | 850 |
AGTTATATAT TGATTGGAAA GTTCGGTCTG GTCCGAGAGA AAACCCGGTT | 900 |
CAGGTGGTGG TTCGGCTTTT CGGAGTTGAT ATCTTTAATG TGACCACCGT | 950 |
GAAGCCAAAC GACGTCGTGG CCGTTTGCGG TGGAAAGAGA TCTCGAGATG | 1000 |
TTGATGATAT GTTTGCGTTA CGGTGTTCCA AGAAGCAGGC GATAATCAAT | 1050 |
GCTTTGTGA | 1100 |
>AT1G68840.1 longest ORF length:352
MDSSCIDEIS SSTSESFSAT TAKKLSPPPA AALRLYRMGS GGSSVVLDPE | 50 |
NGLETESRKL PSSKYKGVVP QPNGRWGAQI YEKHQRVWLG TFNEQEEAAR | 100 |
SYDIAACRFR GRDAVVNFKN VLEDGDLAFL EAHSKAEIVD MLRKHTYADE | 150 |
LEQNNKRQLF LSVDANGKRN GSSTTQNDKV LKTREVLFEK AVTPSDVGKL | 200 |
NRLVIPKQHA EKHFPLPSPS PAVTKGVLIN FEDVNGKVWR FRYSYWNSSQ | 250 |
SYVLTKGWSR FVKEKNLRAG DVVTFERSTG LERQLYIDWK VRSGPRENPV | 300 |
QVVVRLFGVD IFNVTTVKPN DVVAVCGGKR SRDVDDMFAL RCSKKQAIIN | 350 |
AL | 400 |
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